RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 HOXD11P31277 338 aaPredicted RBP11.46□□□□□ -0.57
ATL3-204ENST00000540699 TNFSF9P41273 254 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 MATR3P43243 847 aaKnown RBP eCLIP11.46□□□□□ -0.57
ATL3-204ENST00000540699 CYP2J2P51589 502 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 YARSP54577 528 aaKnown RBP11.46□□□□□ -0.57
ATL3-204ENST00000540699 LRMPQ12912 555 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 TRIM14Q14142 442 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 SYCP1Q15431 976 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 SEZ6Q53EL9 994 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 FKBP15Q5T1M5 1219 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 ZSCAN30Q86W11 494 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 ZNF280BQ86YH2 543 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 COLGALT2Q8IYK4 626 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 TC2NQ8N9U0 490 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 SLC35C1Q96A29 364 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 TSPAN18Q96SJ8 248 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 AAASQ9NRG9 546 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.46□□□□□ -0.57
ATL3-204ENST00000540699 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.46□□□□□ -0.57
ATL3-204ENST00000540699 SCN1AP35498 2009 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 VWA8A3KMH1 1905 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 SMIM28A0A1B0GU29 152 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 H3BNC9 293 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 EXTL3O43909 919 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 EXOC3O60645 756 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 LPXNO60711 386 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 MFAP3LO75121 409 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 EFEMP2O95967 443 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 LDHAP00338 332 aaKnown RBP11.45□□□□□ -0.58
ATL3-204ENST00000540699 THP07101 528 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 GALTP07902 379 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 CXCL8P10145 99 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 FECHP22830 423 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 CTNNB1P35222 781 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 ACOT2P49753 483 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 KLK7P49862 253 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 KCNQ1P51787 676 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 BCAR1P56945 870 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 OSTNP61366 133 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 PLCB3Q01970 1234 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 RNASELQ05823 741 aaKnown RBP11.45□□□□□ -0.58
ATL3-204ENST00000540699 GOLGA8FQ08AF8 430 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 GOLGA8DPQ0D2H9 430 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 KCNMA1Q12791 1236 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 KCNH2Q12809 1159 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 SKIV2LQ15477 1246 aaKnown RBP11.45□□□□□ -0.58
ATL3-204ENST00000540699 ZBTB6Q15916 424 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 FIGNQ5HY92 759 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 KCNT2Q6UVM3 1135 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 TMEM139Q8IV31 216 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 BRSK2Q8IWQ3 736 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 CD302Q8IX05 232 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 SLC39A11Q8N1S5 342 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 XXYLT1Q8NBI6 393 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 ZSWIM2Q8NEG5 633 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 FBXO22Q8NEZ5 403 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 ZMAT2Q96NC0 199 aaKnown RBP11.45□□□□□ -0.58
ATL3-204ENST00000540699 ZNF558Q96NG5 402 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 NECAB3Q96P71 396 aaPredicted RBP11.45□□□□□ -0.58
ATL3-204ENST00000540699 RPS6KC1Q96S38 1066 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 C11orf84Q9BUA3 381 aaPredicted RBP11.45□□□□□ -0.58
ATL3-204ENST00000540699 PCIF1Q9H4Z3 704 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 ASB7Q9H672 318 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 RPF1Q9H9Y2 349 aaKnown RBP11.45□□□□□ -0.58
ATL3-204ENST00000540699 KIAA1586Q9HCI6 787 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 DNAJB4Q9UDY4 337 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 PYCARDQ9ULZ3 195 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 FRMD4BQ9Y2L6 1034 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 PCDHB12Q9Y5F1 795 aa11.45□□□□□ -0.58
ATL3-204ENST00000540699 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.45□□□□□ -0.58
ATL3-204ENST00000540699 LACTBL1A8MY62 500 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 ESPNB1AK53 854 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 AKR1B15C9JRZ8 316 aaPredicted RBP11.44□□□□□ -0.58
ATL3-204ENST00000540699 RNF225M0QZC1 329 aaPredicted RBP11.44□□□□□ -0.58
ATL3-204ENST00000540699 PES1O00541 588 aaKnown RBP11.44□□□□□ -0.58
ATL3-204ENST00000540699 ZC3H11AO75152 810 aaKnown RBP eCLIP11.44□□□□□ -0.58
ATL3-204ENST00000540699 AFPP02771 609 aaKnown RBP11.44□□□□□ -0.58
ATL3-204ENST00000540699 PPM1AP35813 382 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 SLC11A1P49279 550 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 UBE3AQ05086 875 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 ENPEPQ07075 957 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 BFSP1Q12934 665 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 TUSC3Q13454 348 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 HSP90AA2PQ14568 343 aaPredicted RBP11.44□□□□□ -0.58
ATL3-204ENST00000540699 C1orf220Q5T0J3 134 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 DPY19L2P1Q6NXN4 242 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 GPD1LQ8N335 351 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 KLHL23Q8NBE8 558 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 PLEKHO2Q8TD55 490 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 GDPD5Q8WTR4 605 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 IQCDQ96DY2 449 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 FAM213AQ9BRX8 229 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 NUP58Q9BVL2 599 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 SLC38A7Q9NVC3 462 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 SPG21Q9NZD8 308 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 LMCD1Q9NZU5 365 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 COG5Q9UP83 839 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 LZTS1Q9Y250 596 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 DERAQ9Y315 318 aa11.44□□□□□ -0.58
ATL3-204ENST00000540699 A0A1W2PQJ5 194 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms