RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 POLR3BQ9NW08 1133 aaPredicted RBP17.09■□□□□ 0.33
PUDP-206ENST00000540122 VAV3Q9UKW4 847 aa17.09■□□□□ 0.33
PUDP-206ENST00000540122 ZBTB39O15060 712 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 TBX3O15119 743 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 ATG13O75143 517 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 BRCC3P46736 316 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 CLCNKBP51801 687 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 RCAN1P53805 252 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.32
PUDP-206ENST00000540122 TWF1Q12792 350 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 OTUD6AQ7L8S5 288 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 GPIHBP1Q8IV16 184 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 CAMKK1Q8N5S9 505 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 CCDC148Q8NFR7 591 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 LRRC3BQ96PB8 259 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 HHIPQ96QV1 700 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 HELZ2Q9BYK8 2649 aaKnown RBP17.08■□□□□ 0.32
PUDP-206ENST00000540122 EML5Q05BV3 1969 aa17.08■□□□□ 0.32
PUDP-206ENST00000540122 PATE3B3GLJ2 98 aa17.07■□□□□ 0.32
PUDP-206ENST00000540122 PRPF3O43395 683 aaKnown RBP17.07■□□□□ 0.32
PUDP-206ENST00000540122 TRAPPC3O43617 180 aa17.07■□□□□ 0.32
PUDP-206ENST00000540122 KARSQ15046 597 aaKnown RBP17.07■□□□□ 0.32
PUDP-206ENST00000540122 NECTIN1Q15223 517 aa17.07■□□□□ 0.32
PUDP-206ENST00000540122 ARHGAP29Q52LW3 1261 aa17.07■□□□□ 0.32
PUDP-206ENST00000540122 C3orf58Q8NDZ4 430 aa17.07■□□□□ 0.32
PUDP-206ENST00000540122 ADAM32Q8TC27 787 aa17.07■□□□□ 0.32
PUDP-206ENST00000540122 TMEM209Q96SK2 561 aa17.07■□□□□ 0.32
PUDP-206ENST00000540122 VPS54Q9P1Q0 977 aa17.07■□□□□ 0.32
PUDP-206ENST00000540122 SPAARA0A1B0GVQ0 90 aa17.06■□□□□ 0.32
PUDP-206ENST00000540122 EIF4E1BA6NMX2 242 aaKnown RBP17.06■□□□□ 0.32
PUDP-206ENST00000540122 GLRA2P23416 452 aa17.06■□□□□ 0.32
PUDP-206ENST00000540122 ARL2P36404 184 aa17.06■□□□□ 0.32
PUDP-206ENST00000540122 TNK2Q07912 1038 aa17.06■□□□□ 0.32
PUDP-206ENST00000540122 UPP1Q16831 310 aa17.06■□□□□ 0.32
PUDP-206ENST00000540122 TPGS2Q68CL5 300 aa17.06■□□□□ 0.32
PUDP-206ENST00000540122 HAUS6Q7Z4H7 955 aa17.06■□□□□ 0.32
PUDP-206ENST00000540122 ARID3BQ8IVW6 561 aaPredicted RBP17.06■□□□□ 0.32
PUDP-206ENST00000540122 SLKQ9H2G2 1235 aaPredicted RBP17.06■□□□□ 0.32
PUDP-206ENST00000540122 SLC32A1Q9H598 525 aa17.06■□□□□ 0.32
PUDP-206ENST00000540122 RGL1Q9NZL6 768 aa17.06■□□□□ 0.32
PUDP-206ENST00000540122 DDX25Q9UHL0 483 aaKnown RBP17.06■□□□□ 0.32
PUDP-206ENST00000540122 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
PUDP-206ENST00000540122 CCDC196A0A1B0GTZ2 297 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 A0A1W2PRU2 124 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 FAM221BA6H8Z2 402 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 SLC37A4O43826 429 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 SEC24BO95487 1268 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 SIM1P81133 766 aaPredicted RBP17.05■□□□□ 0.32
PUDP-206ENST00000540122 TMEM196Q5HYL7 178 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 GLRA4Q5JXX5 417 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 STXBP5Q5T5C0 1151 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 FSTL4Q6MZW2 842 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 MOXD1Q6UVY6 613 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 PPP1R10Q96QC0 940 aaKnown RBP17.05■□□□□ 0.32
PUDP-206ENST00000540122 MKNK1Q9BUB5 465 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 PDZD7Q9H5P4 517 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 FBXL5Q9UKA1 691 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 MAST4O15021 2626 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 ARID2Q68CP9 1835 aa17.05■□□□□ 0.32
PUDP-206ENST00000540122 TTLL13PA6NNM8 815 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 MEFVO15553 781 aaPredicted RBP17.04■□□□□ 0.32
PUDP-206ENST00000540122 GBP1P32455 592 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 IRX4P78413 519 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
PUDP-206ENST00000540122 GRSF1Q12849 480 aaKnown RBP eCLIP17.04■□□□□ 0.32
PUDP-206ENST00000540122 PMS2CLQ68D20 193 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
PUDP-206ENST00000540122 TMC8Q8IU68 726 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 NOSTRINQ8IVI9 506 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 PRIMPOLQ96LW4 560 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 UROC1Q96N76 676 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 LRRC3Q9BY71 257 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 C22orf23Q9BZE7 217 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 GOLGA2P5Q9HBQ8 144 aa17.04■□□□□ 0.32
PUDP-206ENST00000540122 PRMT7Q9NVM4 692 aaPredicted RBP17.04■□□□□ 0.32
PUDP-206ENST00000540122 H0Y626 953 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 H7C4K7 107 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 DPYSL4O14531 572 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 N4BP3O15049 544 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 RNF40O75150 1001 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 TRIM16O95361 564 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 NLRP5P59047 1200 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 AKAP17AQ02040 695 aaKnown RBP17.03■□□□□ 0.32
PUDP-206ENST00000540122 SCAPQ12770 1279 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 CTTNQ14247 550 aaKnown RBP17.03■□□□□ 0.32
PUDP-206ENST00000540122 EPHA7Q15375 998 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 ITPRIPL2Q3MIP1 535 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 CHCHD4Q8N4Q1 142 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 DYDC2Q96IM9 177 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 ZSWIM4Q9H7M6 989 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 CACNA2D2Q9NY47 1150 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 AFF4Q9UHB7 1163 aaKnown RBP17.03■□□□□ 0.32
PUDP-206ENST00000540122 GDAQ9Y2T3 454 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 CELSR3Q9NYQ7 3312 aa17.03■□□□□ 0.32
PUDP-206ENST00000540122 DGAT1O75907 488 aa17.02■□□□□ 0.32
PUDP-206ENST00000540122 APBB3O95704 486 aa17.02■□□□□ 0.32
PUDP-206ENST00000540122 PLCB2Q00722 1185 aa17.02■□□□□ 0.32
PUDP-206ENST00000540122 CYP4A11Q02928 519 aa17.02■□□□□ 0.32
PUDP-206ENST00000540122 AAMPQ13685 434 aa17.02■□□□□ 0.32
PUDP-206ENST00000540122 MRPL58Q14197 206 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms