RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 PCDHA13Q9Y5I0 950 aa11.12□□□□□ -0.63
PABPC1P4-201ENST00000539977 SMIM28A0A1B0GU29 152 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 DDX3XO00571 662 aaKnown RBP eCLIP11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 ZC3H11AO75152 810 aaKnown RBP eCLIP11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 HSPA1AP0DMV8 641 aaKnown RBP11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 HSPA1BP0DMV9 641 aaKnown RBP11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 ZSCAN20P17040 1043 aaPredicted RBP11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 SSTR3P32745 418 aaPredicted RBP11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 ARHGAP25P42331 645 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 KRT83P78385 493 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 SLC18A3Q16572 532 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 SGSM1Q2NKQ1 1148 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 ARHGAP29Q52LW3 1261 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 ZNF394Q53GI3 561 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 FBXO46Q6PJ61 603 aaPredicted RBP11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 ALKAL1Q6UXT8 129 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 NOP9Q86U38 636 aaKnown RBP11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 FAM126BQ8IXS8 530 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 LNX1Q8TBB1 728 aaPredicted RBP11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 ADAM2Q99965 735 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 PLEKHA5Q9HAU0 1116 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 CACNG4Q9UBN1 327 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 PCDHB4Q9Y5E5 795 aa11.11□□□□□ -0.63
PABPC1P4-201ENST00000539977 CCP110O43303 1012 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 ACO1P21399 889 aaKnown RBP11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 MLH1P40692 756 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 MAGEA1P43355 309 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 CDH8P55286 799 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 ORC1Q13415 861 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 FAM26DQ5JW98 314 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 CCDC122Q5T0U0 273 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 TMEM270Q6UE05 265 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 SYT10Q6XYQ8 523 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 HPDLQ96IR7 371 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 TAS2R14Q9NYV8 317 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 CNTN3Q9P232 1028 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 C2CD2Q9Y426 696 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 PAXBP1Q9Y5B6 917 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 BZW2Q9Y6E2 419 aaKnown RBP11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 MACROD2A1Z1Q3 448 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 FANCGO15287 622 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 RPLP2P05387 115 aaKnown RBP11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 CHRNB2P17787 502 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 IGFBP6P24592 240 aaPredicted RBP11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 ASPAP45381 313 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 GNG11P61952 73 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 POU5F1Q01860 360 aaKnown RBP11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 SOX4Q06945 474 aaPredicted RBP11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 ALKBH5Q6P6C2 394 aaKnown RBP11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 RPUSD2Q8IZ73 545 aaKnown RBP11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 EPS8L1Q8TE68 723 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 RABGGTAQ92696 567 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 JAKMIP2Q96AA8 810 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 WDR24Q96S15 920 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 GAD1Q99259 594 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 AGPAT1Q99943 283 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 SYT11Q9BT88 431 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 NIF3L1Q9GZT8 377 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 SMYD3Q9H7B4 428 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 CHST12Q9NRB3 414 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 NAGPAQ9UK23 515 aa11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 R3HCC1Q9Y3T6 440 aaKnown RBP11.1□□□□□ -0.63
PABPC1P4-201ENST00000539977 PTGESO14684 152 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 LCA5LO95447 670 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 CD4P01730 458 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 MMEP08473 750 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 CCDC172P0C7W6 258 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 ITGA4P13612 1032 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 CYP11B1P15538 503 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 TNFAIP3P21580 790 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 VAV2P52735 878 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 RBP5P82980 135 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 TLE2Q04725 743 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 DSC3Q14574 896 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 ZBTB6Q15916 424 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 TRIM60Q495X7 471 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 SLC39A5Q6ZMH5 540 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 AGMOQ6ZNB7 445 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 LRRC8DQ7L1W4 858 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 ENOSF1Q7L5Y1 443 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 RTN4RL1Q86UN2 441 aaPredicted RBP11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 CD302Q8IX05 232 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 SCLYQ96I15 445 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 PCDHB18PQ96TA0 734 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 SDCBP2Q9H190 292 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 CISHQ9NSE2 258 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 MIOSQ9NXC5 875 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 DNAI1Q9UI46 699 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 NOCTQ9UK39 431 aaKnown RBP11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 DAAM1Q9Y4D1 1078 aa11.09□□□□□ -0.63
PABPC1P4-201ENST00000539977 NBNO60934 754 aa11.08□□□□□ -0.64
PABPC1P4-201ENST00000539977 CFHP08603 1231 aa11.08□□□□□ -0.64
PABPC1P4-201ENST00000539977 SELPP16109 830 aa11.08□□□□□ -0.64
PABPC1P4-201ENST00000539977 ATF7P17544 494 aaPredicted RBP11.08□□□□□ -0.64
PABPC1P4-201ENST00000539977 TBXAS1P24557 533 aaPredicted RBP11.08□□□□□ -0.64
PABPC1P4-201ENST00000539977 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
PABPC1P4-201ENST00000539977 CCL23P55773 120 aa11.08□□□□□ -0.64
PABPC1P4-201ENST00000539977 GPNMBQ14956 572 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms