RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ARHGEF26Q96DR7 871 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 SCLT1Q96NL6 688 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 PCDHB18PQ96TA0 734 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 ZSWIM1Q9BR11 485 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 LRRC1Q9BTT6 524 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 PI4K2AQ9BTU6 479 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 NUP85Q9BW27 656 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 GCOM2Q9BZD3 368 aaPredicted RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 RAB17Q9H0T7 212 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 CDT1Q9H211 546 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 R3HDMLQ9H3Y0 253 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 PLEKHA5Q9HAU0 1116 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 CYP3A43Q9HB55 503 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 OSGEPQ9NPF4 335 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 RBM12Q9NTZ6 932 aaKnown RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 TAS2R14Q9NYV8 317 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 CNOT8Q9UFF9 292 aaKnown RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 MTUS1Q9ULD2 1270 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 DERAQ9Y315 318 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 NOC2LQ9Y3T9 749 aaKnown RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.87□□□□□ -0.67
SPARC-209ENST00000539687 ALG6Q9Y672 507 aa10.87□□□□□ -0.67
SPARC-209ENST00000539687 A6NJR5 290 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 DDX3YO15523 660 aaKnown RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 SPOPO43791 374 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 SEC31AO94979 1220 aaKnown RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 STAU1O95793 577 aaKnown RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 F2P00734 622 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 TFRCP02786 760 aaKnown RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 CALB1P05937 261 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 GNAT1P11488 350 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 SMPD1P17405 629 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 AXLP30530 894 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 MAN1A1P33908 653 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 CTNNA1P35221 906 aaKnown RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 CETN2P41208 172 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 TNNT3P45378 269 aaPredicted RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 CTCFP49711 727 aaPredicted RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 ZNF157P51786 506 aaPredicted RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 ZNF132P52740 706 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 IGBP1P78318 339 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 TFAMQ00059 246 aaKnown RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 DHX34Q14147 1143 aaKnown RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 SMC1AQ14683 1233 aaKnown RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 TAF1CQ15572 869 aaPredicted RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 TMEM270Q6UE05 265 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 RASAL3Q86YV0 1011 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 MCOLN2Q8IZK6 566 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 TMEM35BQ8NCS4 154 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 CCDC102AQ96A19 550 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 APBA2Q99767 749 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 MIS12Q9H081 205 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
SPARC-209ENST00000539687 VRTNQ9H8Y1 702 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 IFT122Q9HBG6 1241 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 ZFYVE28Q9HCC9 887 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 GDF3Q9NR23 364 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 RASAL2Q9UJF2 1139 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 STRIP2Q9ULQ0 834 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 C2CD2Q9Y426 696 aa10.86□□□□□ -0.67
SPARC-209ENST00000539687 A0A087WZ62 844 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 SMIM35A0A1B0GVV1 85 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 FAM187AA6NFU0 413 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 MYO1FO00160 1098 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 THAP12O43422 761 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 HEXIM1O94992 359 aaKnown RBP10.85□□□□□ -0.67
SPARC-209ENST00000539687 EDN1P05305 212 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 PAEPP09466 180 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 POLR2BP30876 1174 aaKnown RBP10.85□□□□□ -0.67
SPARC-209ENST00000539687 DNA2P51530 1060 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 RWDD2BP57060 319 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 CBX1P83916 185 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 PTP4A2Q12974 167 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 ZNF667Q5HYK9 610 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 ZBTB41Q5SVQ8 909 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 ALS2CLQ60I27 953 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 RGMBQ6NW40 437 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 PALB2Q86YC2 1186 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 THNSL1Q8IYQ7 743 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 UBR7Q8N806 425 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 OR5B17Q8NGF7 314 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 FAM71BQ8TC56 605 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 AENQ8WTP8 325 aaKnown RBP10.85□□□□□ -0.67
SPARC-209ENST00000539687 TRAPPC12Q8WVT3 735 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 FAM212AQ96EL1 285 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 MS4A14Q96JA4 679 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 RNPC3Q96LT9 517 aaKnown RBP10.85□□□□□ -0.67
SPARC-209ENST00000539687 KRT12Q99456 494 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 PTPN18Q99952 460 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 FDXACB1Q9BRP7 624 aaPredicted RBP10.85□□□□□ -0.67
SPARC-209ENST00000539687 FAM129AQ9BZQ8 928 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 MTMR12Q9C0I1 747 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 AP5M1Q9H0R1 490 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 APOBEC3GQ9HC16 384 aaKnown RBP10.85□□□□□ -0.67
SPARC-209ENST00000539687 PARVAQ9NVD7 372 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 ITGA11Q9UKX5 1188 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
SPARC-209ENST00000539687 PACSIN2Q9UNF0 486 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms