RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 NUP58Q9BVL2 599 aa6.78□□□□□ -1.32
MDM2-225ENST00000539479 CELF4Q9BZC1 486 aaKnown RBP6.78□□□□□ -1.32
MDM2-225ENST00000539479 EDEM3Q9BZQ6 932 aa6.78□□□□□ -1.32
MDM2-225ENST00000539479 MTMR12Q9C0I1 747 aa6.78□□□□□ -1.32
MDM2-225ENST00000539479 NXF3Q9H4D5 531 aaKnown RBP6.78□□□□□ -1.32
MDM2-225ENST00000539479 ERVK-5Q9HDB9 667 aa6.78□□□□□ -1.32
MDM2-225ENST00000539479 HMX1Q9NP08 348 aaPredicted RBP6.78□□□□□ -1.32
MDM2-225ENST00000539479 TRMT1Q9NXH9 659 aaKnown RBP6.78□□□□□ -1.32
MDM2-225ENST00000539479 TRIM10Q9UDY6 481 aa6.78□□□□□ -1.32
MDM2-225ENST00000539479 OGDHLQ9ULD0 1010 aa6.78□□□□□ -1.32
MDM2-225ENST00000539479 LUC7L2Q9Y383 392 aaKnown RBP6.78□□□□□ -1.32
MDM2-225ENST00000539479 NME7Q9Y5B8 376 aa6.78□□□□□ -1.32
MDM2-225ENST00000539479 TRPV2Q9Y5S1 764 aa6.78□□□□□ -1.32
MDM2-225ENST00000539479 PDCD11Q14690 1871 aaKnown RBP6.78□□□□□ -1.32
MDM2-225ENST00000539479 DDX3XO00571 662 aaKnown RBP eCLIP6.77□□□□□ -1.33
MDM2-225ENST00000539479 KIAA0391O15091 583 aaKnown RBP6.77□□□□□ -1.33
MDM2-225ENST00000539479 ARHGAP6O43182 974 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 ZEB2O60315 1214 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 LCA5LO95447 670 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 CD4P01730 458 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 CCL5P13501 91 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 KRT13P13646 458 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 TMOD1P28289 359 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 GTF2H1P32780 548 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 ABCD1P33897 745 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 GRM5P41594 1212 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 PRKCIP41743 596 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 SOX4Q06945 474 aaPredicted RBP6.77□□□□□ -1.33
MDM2-225ENST00000539479 LPIN1Q14693 890 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 ZBTB6Q15916 424 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 XKR4Q5GH76 650 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 FBXO47Q5MNV8 452 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 ZNF618Q5T7W0 954 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 KRT39Q6A163 491 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 JADE1Q6IE81 842 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 RTN4RL1Q86UN2 441 aaPredicted RBP6.77□□□□□ -1.33
MDM2-225ENST00000539479 GSTCDQ8NEC7 633 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 SLC30A5Q8TAD4 765 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 DIS3LQ8TF46 1054 aaKnown RBP6.77□□□□□ -1.33
MDM2-225ENST00000539479 SLC20A1Q8WUM9 679 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 DDX1Q92499 740 aaKnown RBP6.77□□□□□ -1.33
MDM2-225ENST00000539479 SHC3Q92529 594 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 SYN2Q92777 582 aaPredicted RBP6.77□□□□□ -1.33
MDM2-225ENST00000539479 ZNF333Q96JL9 665 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 SNX27Q96L92 541 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 GCOM2Q9BZD3 368 aaPredicted RBP6.77□□□□□ -1.33
MDM2-225ENST00000539479 LACRTQ9GZZ8 138 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 SDCBP2Q9H190 292 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 NHEJ1Q9H9Q4 299 aaPredicted RBP6.77□□□□□ -1.33
MDM2-225ENST00000539479 KIAA1586Q9HCI6 787 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 RAB20Q9NX57 234 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 SNTG2Q9NY99 539 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 APEX2Q9UBZ4 518 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 KCNG1Q9UIX4 513 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 SALL4Q9UJQ4 1053 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 DNAJC12Q9UKB3 198 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 GINS2Q9Y248 185 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 PPP2R2CQ9Y2T4 447 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 NUB1Q9Y5A7 615 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 COL4A6Q14031 1691 aa6.77□□□□□ -1.33
MDM2-225ENST00000539479 MROH7Q68CQ1 1323 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 SCN1AP35498 2009 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 TET1Q8NFU7 2136 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 A0A087X0T9 212 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 MOXD2PA6NHM9 499 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 PTGESO14684 152 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 B4GALT3O60512 393 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 RECQL4O94761 1208 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 GFPT2O94808 682 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 NDUFA10O95299 355 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 ASS1P00966 412 aaKnown RBP6.76□□□□□ -1.33
MDM2-225ENST00000539479 CLTAP09496 248 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 FAM228BP0C875 321 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 GHRP10912 638 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 COL6A1P12109 1028 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 CD52P31358 61 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 CLCN1P35523 988 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 SOX5P35711 763 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 MMP16P51512 607 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 MYL6P60660 151 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 CYP27A1Q02318 531 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 PTK2Q05397 1052 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 PTK7Q13308 1070 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 RAPGEF1Q13905 1077 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 SUZ12Q15022 739 aaKnown RBP6.76□□□□□ -1.33
MDM2-225ENST00000539479 NAB2Q15742 525 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 PTGISQ16647 500 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 FAM47CQ5HY64 1035 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 TAF2Q6P1X5 1199 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 CYP26C1Q6V0L0 522 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 CATSPER4Q7RTX7 472 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 TRAPPC11Q7Z392 1133 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 RNF180Q86T96 592 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 TMTC1Q8IUR5 882 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 WDR49Q8IV35 697 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 FAM126BQ8IXS8 530 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 FAM71AQ8IYT1 594 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 NME8Q8N427 588 aa6.76□□□□□ -1.33
MDM2-225ENST00000539479 PCSK9Q8NBP7 692 aaKnown RBP6.76□□□□□ -1.33
MDM2-225ENST00000539479 FBXL13Q8NEE6 735 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms