RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 TMEM132AQ24JP5 1023 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 ARHGAP29Q52LW3 1261 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 GPIHBP1Q8IV16 184 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 RSPRY1Q96DX4 576 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 DYDC2Q96IM9 177 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 PRIMPOLQ96LW4 560 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 UROC1Q96N76 676 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 RNF26Q9BY78 433 aaPredicted RBP13.28□□□□□ -0.28
YBX3-207ENST00000539204 PRMT7Q9NVM4 692 aaPredicted RBP13.28□□□□□ -0.28
YBX3-207ENST00000539204 CEP72Q9P209 647 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 ANKFY1Q9P2R3 1169 aa13.28□□□□□ -0.28
YBX3-207ENST00000539204 LNP1A1A4G5 178 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 KHNYNO15037 678 aaKnown RBP13.27□□□□□ -0.29
YBX3-207ENST00000539204 N4BP3O15049 544 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 TBX3O15119 743 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 HYAL3O43820 417 aaPredicted RBP13.27□□□□□ -0.29
YBX3-207ENST00000539204 MARCH6O60337 910 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 ZIC2O95409 532 aaPredicted RBP13.27□□□□□ -0.29
YBX3-207ENST00000539204 EPHA5P54756 1037 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 TWF1Q12792 350 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 CTTNQ14247 550 aaKnown RBP13.27□□□□□ -0.29
YBX3-207ENST00000539204 PTPAQ15257 358 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 UPP1Q16831 310 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 KIAA1211LQ6NV74 962 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 CD300LGQ6UXG3 332 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 NOSTRINQ8IVI9 506 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 ARID3BQ8IVW6 561 aaPredicted RBP13.27□□□□□ -0.29
YBX3-207ENST00000539204 TMEM209Q96SK2 561 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 ADPGKQ9BRR6 497 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 SLC26A6Q9BXS9 759 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 SLC32A1Q9H598 525 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 ANO2Q9NQ90 1003 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 MAFFQ9ULX9 164 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 PCDHA4Q9UN74 947 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 NCANO14594 1321 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 COL4A2P08572 1712 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 VWA8A3KMH1 1905 aa13.27□□□□□ -0.29
YBX3-207ENST00000539204 SLC37A4O43826 429 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 SLITRK3O94933 977 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 RDXP35241 583 aaKnown RBP13.26□□□□□ -0.29
YBX3-207ENST00000539204 CYP4A11Q02928 519 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 GRSF1Q12849 480 aaKnown RBP eCLIP13.26□□□□□ -0.29
YBX3-207ENST00000539204 ITPR1Q14643 2758 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 UAP1L1Q3KQV9 507 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 PPP4R3AQ6IN85 833 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 PKN3Q6P5Z2 889 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 C19orf48Q6RUI8 117 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 DEFB124Q8NES8 71 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 ZFYVE19Q96K21 471 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 PPP1R10Q96QC0 940 aaKnown RBP13.26□□□□□ -0.29
YBX3-207ENST00000539204 FZD8Q9H461 694 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 KCNMB3Q9NPA1 279 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 GDAQ9Y2T3 454 aa13.26□□□□□ -0.29
YBX3-207ENST00000539204 A0A1W2PRU2 124 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 LRRIQ4A6NIV6 560 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 EIF4E1BA6NMX2 242 aaKnown RBP13.25□□□□□ -0.29
YBX3-207ENST00000539204 CDX4O14627 284 aaPredicted RBP13.25□□□□□ -0.29
YBX3-207ENST00000539204 SYN3O14994 580 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 DCLK1O15075 740 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 PRKCBP05771 671 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 HMGB1P09429 215 aaKnown RBP13.25□□□□□ -0.29
YBX3-207ENST00000539204 PLCB2Q00722 1185 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 PRPF4BQ13523 1007 aaKnown RBP13.25□□□□□ -0.29
YBX3-207ENST00000539204 KARSQ15046 597 aaKnown RBP13.25□□□□□ -0.29
YBX3-207ENST00000539204 NTRK3Q16288 839 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 FAM187BQ17R55 369 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 INF2Q27J81 1249 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 ADCK5Q3MIX3 580 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 GLRA4Q5JXX5 417 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 NCAPH2Q6IBW4 605 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 PDZD3Q86UT5 571 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 BLIDQ8IZY5 108 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 SHKBP1Q8TBC3 707 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 CCDC43Q96MW1 224 aaKnown RBP13.25□□□□□ -0.29
YBX3-207ENST00000539204 LRRC3BQ96PB8 259 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 ESYT1Q9BSJ8 1104 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 POLR3FQ9H1D9 316 aaPredicted RBP13.25□□□□□ -0.29
YBX3-207ENST00000539204 PDZD7Q9H5P4 517 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 ANKEF1Q9NU02 776 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 AFF4Q9UHB7 1163 aaKnown RBP13.25□□□□□ -0.29
YBX3-207ENST00000539204 FBXL5Q9UKA1 691 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 KLK13Q9UKR3 277 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 GPSM3Q9Y4H4 160 aa13.25□□□□□ -0.29
YBX3-207ENST00000539204 LOC400499M0QZD8 3231 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 GBP1P32455 592 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 TNK2Q07912 1038 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 MRPL58Q14197 206 aaKnown RBP13.24□□□□□ -0.29
YBX3-207ENST00000539204 ITPRIPL2Q3MIP1 535 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 TSGA10IPQ3SY00 556 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 CTXN3Q4LDR2 81 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 TMEM196Q5HYL7 178 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 PROSER1Q86XN7 944 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 C3orf58Q8NDZ4 430 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 GOLGA2P5Q9HBQ8 144 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 THG1LQ9NWX6 298 aaKnown RBP13.24□□□□□ -0.29
YBX3-207ENST00000539204 OBP2AQ9NY56 170 aa13.24□□□□□ -0.29
YBX3-207ENST00000539204 DAXXQ9UER7 740 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms