RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	STAM	Q92783	540 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	C18orf25	Q96B23	403 aa	Predicted RBP	13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PRKD2	Q9BZL6	878 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	POMK	Q9H5K3	350 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CACNG4	Q9UBN1	327 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PCDHB8	Q9UN66	801 aa		13.36	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PIR	O00625	290 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ACTN4	O43707	911 aa	Known RBP	13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	EXTL3	O43909	919 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	OAZ2	O95190	189 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	MYB	P10242	640 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TYMP	P19971	482 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TKT	P29401	623 aa	Known RBP	13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CASP5	P51878	434 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	KCNA1	Q09470	495 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	JADE1	Q6IE81	842 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CCDC149	Q6ZUS6	474 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	OTOP3	Q7RTS5	596 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	RNF135	Q8IUD6	432 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	C12orf56	Q8IXR9	622 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ZNF461	Q8TAF7	563 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CCDC34	Q96HJ3	373 aa		13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	WDR6	Q9NNW5	1121 aa	Known RBP	13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.35	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CCDC195	A0A1B0GUA6	201 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	SPDYE4	A6NLX3	237 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ABLIM3	O94929	683 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PFKFB1	P16118	471 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	MCM4	P33991	863 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PNPLA4	P41247	253 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	BRCC3	P46736	316 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ACOT2	P49753	483 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	VARS2	Q5ST30	1063 aa	Known RBP	13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ZBTB41	Q5SVQ8	909 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	LIN9	Q5TKA1	542 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ZNF280D	Q6N043	979 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TMC5	Q6UXY8	1006 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	PALB2	Q86YC2	1186 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	GPD1L	Q8N335	351 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	CACTIN	Q8WUQ7	758 aa	Known RBP	13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	NXPE3	Q969Y0	559 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ZNF707	Q96C28	371 aa	Predicted RBP	13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	ACSF2	Q96CM8	615 aa	Predicted RBP	13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	B3GALT6	Q96L58	329 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TBC1D7	Q9P0N9	293 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	TUBGCP4	Q9UGJ1	667 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	DSE	Q9UL01	958 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	MYO10	Q9HD67	2058 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	C2orf16	Q68DN1	1984 aa		13.34	□□□□□ -0.27
CLTCL1-205	ENST00000538828	OR6C75	A6NL08	312 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	XYLB	O75191	536 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	PRPF6	O94906	941 aa	Known RBP	13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	CYP11A1	P05108	521 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ATF2	P15336	505 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	OR1D2	P34982	312 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SYK	P43405	635 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	LILRA4	P59901	499 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	C9orf57	Q5W0N0	161 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KANK3	Q6NY19	840 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ARMCX5	Q6P1M9	558 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	HS2ST1	Q7LGA3	356 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	BMP8A	Q7Z5Y6	402 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TCEAL8	Q8IYN2	117 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	C12orf76	Q8N812	135 aa	Predicted RBP	13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	GOLGA5	Q8TBA6	731 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SPATA18	Q8TC71	538 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	EDA	Q92838	391 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	PAGE5	Q96GU1	130 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	RPGRIP1	Q96KN7	1286 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	EPHX3	Q9H6B9	360 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	AVEN	Q9NQS1	362 aa	Predicted RBP	13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	HSFX1	Q9UBD0	423 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	CDY1	Q9Y6F8	540 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	DOCK8	Q8NF50	2099 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TRIO	O75962	3097 aa		13.33	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ZNF233	A6NK53	670 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	PRR33	A8MZF0	331 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TISP43	B9A030	160 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KLRC4	O43908	158 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	KIF20A	O95235	890 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	C8A	P07357	584 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	NFIC	P08651	508 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	RPL17	P18621	184 aa	Known RBP	13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	IGFBP6	P24592	240 aa	Predicted RBP	13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	HOXD13	P35453	343 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	YWHAH	Q04917	246 aa	Predicted RBP	13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SMARCB1	Q12824	385 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	MYBPC2	Q14324	1141 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TMEM31	Q5JXX7	168 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	UBALD2	Q8IYN6	164 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	LRRC52	Q8N7C0	313 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	TDRD5	Q8NAT2	981 aa	Known RBP	13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SCFD1	Q8WVM8	642 aa		13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	SMG7	Q92540	1137 aa	Known RBP	13.32	□□□□□ -0.28
CLTCL1-205	ENST00000538828	ZNF560	Q96MR9	790 aa		13.32	□□□□□ -0.28

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