RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PAGR1Q9BTK6 254 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 ADCY3O60266 1144 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 GJC1P36383 396 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 SLC1A1P43005 524 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 TRIP13Q15645 432 aaPredicted RBP26.53■■□□□ 1.84
RAB40C-204ENST00000538492 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.53■■□□□ 1.84
RAB40C-204ENST00000538492 PPP2R3BQ9Y5P8 575 aa26.53■■□□□ 1.84
RAB40C-204ENST00000538492 NF2P35240 595 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 RFC5P40937 340 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 LIN9Q5TKA1 542 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 FAM212AQ96EL1 285 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 FAM118BQ9BPY3 351 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 ASIC3Q9UHC3 531 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 USTQ9Y2C2 406 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 PROSCO94903 275 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 CST3P01034 146 aaPredicted RBP26.52■■□□□ 1.84
RAB40C-204ENST00000538492 PTPRFP10586 1907 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 SSR1P43307 286 aaKnown RBP26.52■■□□□ 1.84
RAB40C-204ENST00000538492 SLCO1A2P46721 670 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 MAMLD1Q13495 774 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 GADL1Q6ZQY3 521 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 AZI2Q9H6S1 392 aa26.52■■□□□ 1.84
RAB40C-204ENST00000538492 R3HDM2Q9Y2K5 976 aaKnown RBP26.52■■□□□ 1.84
RAB40C-204ENST00000538492 GMNCA6NCL1 334 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 SRGAP2CP0DJJ0 459 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 RIOX2Q8IUF8 465 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 NLGN2Q8NFZ4 835 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 EPS8L3Q8TE67 593 aaKnown RBP26.51■■□□□ 1.83
RAB40C-204ENST00000538492 TMEM134Q9H6X4 195 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 CD2APQ9Y5K6 639 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 RIPK2O43353 540 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 TRAPPC3O43617 180 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 TAS2R40P59535 323 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 TRIM50Q86XT4 487 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 RAPGEF5Q92565 580 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 MAF1Q9H063 256 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 SPATC1LQ9H0A9 340 aa26.51■■□□□ 1.83
RAB40C-204ENST00000538492 TP73O15350 636 aa26.5■■□□□ 1.83
RAB40C-204ENST00000538492 RALAP11233 206 aa26.5■■□□□ 1.83
RAB40C-204ENST00000538492 RARGP13631 454 aa26.5■■□□□ 1.83
RAB40C-204ENST00000538492 TBXAS1P24557 533 aaPredicted RBP26.5■■□□□ 1.83
RAB40C-204ENST00000538492 LIG3P49916 1009 aa26.5■■□□□ 1.83
RAB40C-204ENST00000538492 BYSLQ13895 437 aaKnown RBP26.5■■□□□ 1.83
RAB40C-204ENST00000538492 SLMAPQ14BN4 828 aa26.5■■□□□ 1.83
RAB40C-204ENST00000538492 FAM160B1Q5W0V3 765 aa26.5■■□□□ 1.83
RAB40C-204ENST00000538492 KCNN1Q92952 543 aa26.5■■□□□ 1.83
RAB40C-204ENST00000538492 IFI35P80217 286 aaPredicted RBP26.5■■□□□ 1.83
RAB40C-204ENST00000538492 NEDD9Q14511 834 aa26.5■■□□□ 1.83
RAB40C-204ENST00000538492 CCDC114Q96M63 670 aa26.5■■□□□ 1.83
RAB40C-204ENST00000538492 RGS16O15492 202 aaPredicted RBP26.49■■□□□ 1.83
RAB40C-204ENST00000538492 MAFO75444 373 aaPredicted RBP26.49■■□□□ 1.83
RAB40C-204ENST00000538492 POTEJP0CG39 1038 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 EDNRBP24530 442 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 TRIM72Q6ZMU5 477 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 SLCO2A1Q92959 643 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 MTMR12Q9C0I1 747 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 TLR3O15455 904 aaKnown RBP26.49■■□□□ 1.83
RAB40C-204ENST00000538492 CD58P19256 250 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 LRRC71Q8N4P6 559 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 SEPT1Q8WYJ6 367 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 PGM2Q96G03 612 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 ZNF668Q96K58 619 aaPredicted RBP26.49■■□□□ 1.83
RAB40C-204ENST00000538492 IMPG2Q9BZV3 1241 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 DCLK3Q9C098 648 aa26.49■■□□□ 1.83
RAB40C-204ENST00000538492 A0A087WUV0 522 aaPredicted RBP26.48■■□□□ 1.83
RAB40C-204ENST00000538492 VPS41P49754 854 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 ZNF394Q53GI3 561 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 TADA2BQ86TJ2 420 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 GPC2Q8N158 579 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.48■■□□□ 1.83
RAB40C-204ENST00000538492 ZNF606Q8WXB4 792 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 SELENOSQ9BQE4 189 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 MRPL47Q9HD33 250 aaKnown RBP26.48■■□□□ 1.83
RAB40C-204ENST00000538492 SRRM3A6NNA2 597 aaPredicted RBP26.48■■□□□ 1.83
RAB40C-204ENST00000538492 MSCO60682 206 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 PGK2P07205 417 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 PHF13Q86YI8 300 aaPredicted RBP26.48■■□□□ 1.83
RAB40C-204ENST00000538492 MICALL1Q8N3F8 863 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 PPM1EQ8WY54 764 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 DDX23Q9BUQ8 820 aaKnown RBP26.48■■□□□ 1.83
RAB40C-204ENST00000538492 DNAJC17Q9NVM6 304 aaKnown RBP26.48■■□□□ 1.83
RAB40C-204ENST00000538492 KLHL11Q9NVR0 708 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 CNTN6Q9UQ52 1028 aa26.48■■□□□ 1.83
RAB40C-204ENST00000538492 ARIH2O95376 493 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 PTP4A2Q12974 167 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 R3HDM1Q15032 1099 aaKnown RBP26.47■■□□□ 1.83
RAB40C-204ENST00000538492 QPCTQ16769 361 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 METTL7BQ6UX53 244 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 BRSK2Q8IWQ3 736 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 RHOT1Q8IXI2 618 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 WHRNQ9P202 907 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 CHKAP35790 457 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 MYL6P60660 151 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 HSDL1Q3SXM5 330 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 PLEKHA7Q6IQ23 1121 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 RNF149Q8NC42 400 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 CDC42EP4Q9H3Q1 356 aaKnown RBP26.47■■□□□ 1.83
RAB40C-204ENST00000538492 AAASQ9NRG9 546 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 CSADQ9Y600 493 aa26.47■■□□□ 1.83
RAB40C-204ENST00000538492 FAM189A1O60320 539 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms