RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 CCR3P51677 355 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 TFAP4Q01664 338 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 ARID5AQ03989 594 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 PTGDRQ13258 359 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 PDE1CQ14123 709 aaPredicted RBP11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 KYNUQ16719 465 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 MMEL1Q495T6 779 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 DSTYKQ6XUX3 929 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 TREML1Q86YW5 311 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 BBS5Q8N3I7 341 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 GIPC3Q8TF64 312 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 KAZALD1Q96I82 304 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 COX4I2Q96KJ9 171 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 PARK7Q99497 189 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 TSG101Q99816 390 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 MXD3Q9BW11 206 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 MAK16Q9BXY0 300 aaKnown RBP11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 SEMA4AQ9H3S1 761 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 SPC25Q9HBM1 224 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 TRPC7Q9HCX4 862 aa11.5□□□□□ -0.57
CLSTN3-207ENST00000537408 NPHP3-ACAD11A0A0J9YXS1 232 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 ESRRAP11474 423 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 RARGP13631 454 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 ANPEPP15144 967 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 PGM1P36871 562 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 DYNLL1P63167 89 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 BRDTQ58F21 947 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 FAM47AQ5JRC9 791 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 PACS1Q6VY07 963 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 GIMAP8Q8ND71 665 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 OXER1Q8TDS5 423 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 EEF2KMTQ96G04 330 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 NSL1Q96IY1 281 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 CYTH2Q99418 400 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 TTC1Q99614 292 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 CADM1Q9BY67 442 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 HESX1Q9UBX0 185 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 HEY1Q9Y5J3 304 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 USP17L5A8MUK1 530 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 FBP2O00757 339 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 RHOBTB3O94955 611 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 LONP1P36776 959 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 PCYT1AP49585 367 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 NAA20P61599 178 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 LONRF1Q17RB8 773 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 DUPD1Q68J44 220 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 SGMS1Q86VZ5 419 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 DDI1Q8WTU0 396 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 SELENONQ9NZV5 590 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 PRELID1Q9Y255 219 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 TRIM17Q9Y577 477 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 BTNL10A8MVZ5 291 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 WNT10BO00744 389 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 IL1R1P14778 569 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 PTENP60484 403 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 RELAQ04206 551 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 PPP2R5CQ13362 524 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 SPARCL1Q14515 664 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 NDUFA5Q16718 116 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 ASTE1Q2TB18 679 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 MIIPQ5JXC2 388 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 ERO1BQ86YB8 467 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 CXorf38Q8TB03 319 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 FBXO25Q8TCJ0 367 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 PLEKHO2Q8TD55 490 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 FAM161BQ96MY7 647 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 SIK3Q9Y2K2 1263 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 STXBP5LQ9Y2K9 1186 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 FAM205AQ6ZU69 1335 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 PRKAB2O43741 272 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 SERPINB7O75635 380 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 VDRP11473 427 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 CRABP2P29373 138 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 RFX5P48382 616 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 DRG2P55039 364 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 PTPROQ16827 1216 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 SYCP2LQ5T4T6 812 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 KLHDC10Q6PID8 442 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 NLRP9Q7RTR0 991 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 JAMLQ86YT9 394 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 DDHD1Q8NEL9 900 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 CCDC110Q8TBZ0 833 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 EHMT1Q9H9B1 1298 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 CREBZFQ9NS37 354 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 SATB2Q9UPW6 733 aa11.49□□□□□ -0.57
CLSTN3-207ENST00000537408 TRPA1O75762 1119 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 TAC1P20366 129 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 LIFRP42702 1097 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 NAPAP54920 295 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 ATP2C1P98194 919 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 CNNM4Q6P4Q7 775 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 EPM2AIP1Q7L775 607 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 SFR1Q86XK3 245 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 LCORLQ8N3X6 602 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 RASGEF1CQ8N431 466 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 RAET1EQ8TD07 263 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 DNAJB4Q9UDY4 337 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 SH3PXD2BA1X283 911 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 F8W8V4 182 aa11.48□□□□□ -0.57
CLSTN3-207ENST00000537408 SPTLC1O15269 473 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms