RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 HNRNPLP14866 589 aaKnown RBP eCLIP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 BMP7P18075 431 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 RPL17P18621 184 aaKnown RBP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 GNAT2P19087 354 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 FLT3LGP49771 235 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 GPSM2P81274 684 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 ATP2C1P98194 919 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 RTP5Q14D33 572 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 MST1LQ2TV78 715 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 ARHGAP29Q52LW3 1261 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 FAM47AQ5JRC9 791 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 ATAT1Q5SQI0 421 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 TOM1L2Q6ZVM7 507 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 APBB1IPQ7Z5R6 666 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 CIR1Q86X95 450 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 LYSMD2Q8IV50 215 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 RHOT1Q8IXI2 618 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 GSPT2Q8IYD1 628 aaKnown RBP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 PQLC1Q8N2U9 271 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 MARCH10Q8NA82 808 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 ZFP28Q8NHY6 868 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 NRG4Q8WWG1 115 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 BORCS6Q96GS4 357 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 TEPSINQ96N21 525 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 SOX7Q9BT81 388 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 WDCPQ9H6R7 721 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 IL23AQ9NPF7 189 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 TLR9Q9NR96 1032 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 AURKAIP1Q9NWT8 199 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 RAPGEFL1Q9UHV5 662 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 SCOCQ9UIL1 159 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 PCDHGA9Q9Y5G4 932 aaKnown RBP4.1□□□□□ -1.75
SNHG1-202ENST00000535689 PCDHGA8Q9Y5G5 932 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 PCDHGA7Q9Y5G6 932 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 PCDHGA6Q9Y5G7 932 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 PCDHGA3Q9Y5H0 932 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 KIAA0232Q92628 1395 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 BCL9O00512 1426 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 MYOM1P52179 1685 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 ALS2Q96Q42 1657 aa4.1□□□□□ -1.75
SNHG1-202ENST00000535689 C2orf78A6NCI8 922 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 PRR5-ARHGAP8B1AHC4 643 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 H3BML4 177 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 PLATP00750 562 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 MYL1P05976 194 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 ZNF888P0CJ79 500 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 C5AR1P21730 350 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 CFPP27918 469 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 ADSLP30566 484 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 PTPN7P35236 360 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 CCT2P78371 535 aaKnown RBP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 FSTL1Q12841 308 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 OS9Q13438 667 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 FAM111BQ6SJ93 734 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 LARP4Q71RC2 724 aaKnown RBP eCLIP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 POLNQ7Z5Q5 900 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 CATIPQ7Z7H3 387 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 BCL6BQ8N143 479 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 DNAJC5GQ8N7S2 189 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 SLC35G2Q8TBE7 412 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 HPS3Q969F9 1004 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 MBD6Q96DN6 1003 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 MVB12AQ96EY5 273 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 NEIL1Q96FI4 390 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 SYT3Q9BQG1 590 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 SARS2Q9NP81 518 aaKnown RBP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 SIDT1Q9NXL6 827 aaKnown RBP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 TFCP2L1Q9NZI6 479 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 MAGEL2Q9UJ55 1249 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 OAZ3Q9UMX2 235 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 BRD4O60885 1362 aaPredicted RBP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 CRB1P82279 1406 aa4.09□□□□□ -1.75
SNHG1-202ENST00000535689 YTHDC2Q9H6S0 1430 aaKnown RBP4.09□□□□□ -1.75
SNHG1-202ENST00000535689 ITSN1Q15811 1721 aa4.09□□□□□ -1.76
SNHG1-202ENST00000535689 A0A1B0GTL3 188 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 CCDC154A6NI56 674 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 GOLGA6L6A8MZA4 724 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 FAM227AF5H4B4 570 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 FOXN3O00409 490 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-202ENST00000535689 HTRA2O43464 458 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-202ENST00000535689 AP1G1O43747 822 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 CPDO75976 1380 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 GCP02774 474 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 GNAI3P08754 354 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 PHKG2P15735 406 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 ATP7BP35670 1465 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 GNAI1P63096 354 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 SATB1Q01826 763 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 HGFACQ04756 655 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 RIN1Q13671 783 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 GRM7Q14831 915 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 QSER1Q2KHR3 1735 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 SSH2Q76I76 1423 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 GPR155Q7Z3F1 870 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 DAAM2Q86T65 1068 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 DGKHQ86XP1 1220 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 DENND1CQ8IV53 801 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 PRR18Q8N4B5 295 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 TP53I13Q8NBR0 393 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-202ENST00000535689 KCNH5Q8NCM2 988 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms