RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 CA14Q9ULX7 337 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 PCDHB8Q9UN66 801 aa17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 MRPS23Q9Y3D9 190 aaKnown RBP17.62■□□□□ 0.41
CLSTN3-204ENST00000535313 A0A0B4J269 797 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 ARHGEF37A1IGU5 675 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 LACTBL1A8MY62 500 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 PI15O43692 258 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 SYT1P21579 422 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 LRPAP1P30533 357 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 TNFSF9P41273 254 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 PTPAQ15257 358 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 SPECC1Q5M775 1068 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 TPGS2Q68CL5 300 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 PARM1Q6UWI2 310 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 GPR152Q8TDT2 470 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 FGF14Q92915 247 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 INTS4Q96HW7 963 aaKnown RBP17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 SLC2A4RGQ9NR83 387 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 STK17AQ9UEE5 414 aa17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 SRPRBQ9Y5M8 271 aaKnown RBP17.61■□□□□ 0.41
CLSTN3-204ENST00000535313 ZFHX2Q9C0A1 2572 aaPredicted RBP17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 KRBA1A5PL33 1030 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 RHOP08100 348 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 PTPN2P17706 415 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 NMT1P30419 496 aaKnown RBP17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 GTF2BQ00403 316 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 RESTQ13127 1097 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 ZBTB6Q15916 424 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 ZBTB41Q5SVQ8 909 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 RRAGBQ5VZM2 374 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 USP49Q70CQ1 688 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 MAP4K3Q8IVH8 894 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 CD302Q8IX05 232 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 TCEAL8Q8IYN2 117 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 FAM212AQ96EL1 285 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 RPP25Q9BUL9 199 aaKnown RBP17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 TBC1D17Q9HA65 648 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 ARHGEF3Q9NR81 526 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 FBXO2Q9UK22 296 aaPredicted RBP17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 MAFFQ9ULX9 164 aa17.6■□□□□ 0.41
CLSTN3-204ENST00000535313 PDCD11Q14690 1871 aaKnown RBP17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 M0QZQ0 153 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 FAM189A1O60320 539 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 YWHAHQ04917 246 aaPredicted RBP17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 ADCY1Q08828 1119 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 DSTYKQ6XUX3 929 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 USP37Q86T82 979 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 NPAS3Q8IXF0 933 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 CCDC105Q8IYK2 499 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 ELMOD1Q8N336 334 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 BEST2Q8NFU1 509 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 ING5Q8WYH8 240 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 FIZ1Q96SL8 496 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 OXCT2Q9BYC2 517 aaPredicted RBP17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 BACH2Q9BYV9 841 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 AVENQ9NQS1 362 aaPredicted RBP17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 GDE1Q9NZC3 331 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 AFF4Q9UHB7 1163 aaKnown RBP17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 CPSF3Q9UKF6 684 aaKnown RBP17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 INSL5Q9Y5Q6 135 aa17.59■□□□□ 0.41
CLSTN3-204ENST00000535313 SEC24AO95486 1093 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 ADRB2P07550 413 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 CPB1P15086 417 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 GUCY2FP51841 1108 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 GPC5P78333 572 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 ZC2HC1CQ53FD0 456 aaPredicted RBP17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 ADALQ6DHV7 355 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 SLFN12LQ6IEE8 588 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 PHLDB3Q6NSJ2 640 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 FAM173BQ6P4H8 233 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 SLC39A4Q6P5W5 647 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 SV2BQ7L1I2 683 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 DYMQ7RTS9 669 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 DTWD2Q8NBA8 298 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 SHDQ96IW2 340 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 CLIC6Q96NY7 704 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 CORO1BQ9BR76 489 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 ST6GALNAC4Q9H4F1 302 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
CLSTN3-204ENST00000535313 ZNF197O14709 1029 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 GFRA3O60609 400 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 OAZ2O95190 189 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 AARSP49588 968 aaKnown RBP eCLIP17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 SLC5A9Q2M3M2 681 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 SPATA1Q5VX52 437 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 JADE1Q6IE81 842 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 IQCEQ6IPM2 695 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 CCDC73Q6ZRK6 1079 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 ZNF720Q7Z2F6 126 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 SFR1Q86XK3 245 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 TMEM130Q8N3G9 435 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 MCRS1Q96EZ8 462 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 ZNF512Q96ME7 567 aaPredicted RBP17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 KXD1Q9BQD3 176 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 ZSCAN16Q9H4T2 348 aaPredicted RBP17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 MTMR6Q9Y217 621 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 DERAQ9Y315 318 aa17.57■□□□□ 0.4
CLSTN3-204ENST00000535313 TIMM13Q9Y5L4 95 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms