RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PLA2G4BP0C869 781 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 MAPTP10636 758 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 MCF2P10911 925 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 KCNE1P15382 129 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 FSHRP23945 695 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 SOX4Q06945 474 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 PSMD5Q16401 504 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 GLRA4Q5JXX5 417 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 LAIR1Q6GTX8 287 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 MPZL3Q6UWV2 235 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 PRR23BQ6ZRT6 265 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 APBB1IPQ7Z5R6 666 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 GLYCTKQ8IVS8 523 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 C3orf58Q8NDZ4 430 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 DDX1Q92499 740 aaKnown RBP11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 ZBTB45Q96K62 511 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 AK8Q96MA6 479 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 UROC1Q96N76 676 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 FAM126AQ9BYI3 521 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 HAPLN2Q9GZV7 340 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 GOLGA2P5Q9HBQ8 144 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 BLOC1S4Q9NUP1 217 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 CNTN3Q9P232 1028 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 KCNG1Q9UIX4 513 aa11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 ZFP37Q9Y6Q3 630 aaPredicted RBP11.02□□□□□ -0.65
CLSTN3-203ENST00000534830 GDF9O60383 454 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 TOM1L1O75674 476 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 B3GAT3O94766 335 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 RETP07949 1114 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 POU2F2P09086 479 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 TARSP26639 723 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 PMLP29590 882 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 HOXA9P31269 272 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 NCKAP1LP55160 1127 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 PFKPQ01813 784 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 GRIN1Q05586 938 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 MCL1Q07820 350 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 RAB33AQ14088 237 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 SLC10A6Q3KNW5 377 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 ZNF568Q3ZCX4 644 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 N4BP2L1Q5TBK1 243 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 IL31Q6EBC2 164 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 PDXDC1Q6P996 788 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 RSPO2Q6UXX9 243 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 PRR23CQ6ZRP0 262 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 TPRG1Q6ZUI0 275 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 MTSS1LQ765P7 747 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 BRAPQ7Z569 592 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 CEP57Q86XR8 500 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 CELF5Q8N6W0 485 aaKnown RBP11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 ACAP3Q96P50 834 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 FIZ1Q96SL8 496 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 NELL2Q99435 816 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 PLIN2Q99541 437 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 CCDC94Q9BW85 323 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 PRMT8Q9NR22 394 aaPredicted RBP11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 SEMA4GQ9NTN9 838 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 MTRRQ9UBK8 725 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 ANK1P16157 1881 aa11.01□□□□□ -0.65
CLSTN3-203ENST00000534830 NPHP3-ACAD11A0A0J9YXS1 232 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 LRP3O75074 770 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 BMP15O95972 392 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 HNRNPA1P09651 372 aaKnown RBP eCLIP11□□□□□ -0.65
CLSTN3-203ENST00000534830 TKTP29401 623 aaKnown RBP11□□□□□ -0.65
CLSTN3-203ENST00000534830 LONP1P36776 959 aaKnown RBP11□□□□□ -0.65
CLSTN3-203ENST00000534830 BRCC3P46736 316 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 ZNF131P52739 623 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 SMTNP53814 917 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 YARSP54577 528 aaKnown RBP11□□□□□ -0.65
CLSTN3-203ENST00000534830 NRLP54845 237 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 OSTNP61366 133 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 RAD51AP2Q09MP3 1159 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 MTAPQ13126 283 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 MRPL58Q14197 206 aaKnown RBP11□□□□□ -0.65
CLSTN3-203ENST00000534830 ZRSR1Q15695 479 aaKnown RBP11□□□□□ -0.65
CLSTN3-203ENST00000534830 UVSSAQ2YD98 709 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 ZPBP2Q6X784 338 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 RTL10Q7L3V2 364 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 GRASPQ7Z6J2 395 aaPredicted RBP11□□□□□ -0.65
CLSTN3-203ENST00000534830 CLDN23Q96B33 292 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 DDX27Q96GQ7 796 aaKnown RBP11□□□□□ -0.65
CLSTN3-203ENST00000534830 KXD1Q9BQD3 176 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 TOPORSQ9NS56 1045 aaPredicted RBP11□□□□□ -0.65
CLSTN3-203ENST00000534830 SLC38A7Q9NVC3 462 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 CDH7Q9ULB5 785 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 ODF2LQ9ULJ1 636 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 BACE2Q9Y5Z0 518 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 ASPMQ8IZT6 3477 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 FRYQ5TBA9 3013 aa11□□□□□ -0.65
CLSTN3-203ENST00000534830 PODXLO00592 558 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 FAM189A1O60320 539 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 PIGRP01833 764 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 PROS1P07225 676 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 ADRB2P07550 413 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 RPL9P32969 192 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 OR1D2P34982 312 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 RPS9P46781 194 aaKnown RBP10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 NTHL1P78549 312 aa10.99□□□□□ -0.65
CLSTN3-203ENST00000534830 SHC2P98077 582 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms