RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 STMN4Q9H169 189 aaPredicted RBP18.37■□□□□ 0.53
SIPA1-209ENST00000534313 RNF146Q9NTX7 359 aa18.37■□□□□ 0.53
SIPA1-209ENST00000534313 WHRNQ9P202 907 aa18.37■□□□□ 0.53
SIPA1-209ENST00000534313 PCDHB4Q9Y5E5 795 aa18.37■□□□□ 0.53
SIPA1-209ENST00000534313 GAS8O95995 478 aa18.37■□□□□ 0.53
SIPA1-209ENST00000534313 NR3C2P08235 984 aa18.37■□□□□ 0.53
SIPA1-209ENST00000534313 PSMC4P43686 418 aa18.37■□□□□ 0.53
SIPA1-209ENST00000534313 TDRD10Q5VZ19 366 aaKnown RBP18.37■□□□□ 0.53
SIPA1-209ENST00000534313 ANKEF1Q9NU02 776 aa18.37■□□□□ 0.53
SIPA1-209ENST00000534313 PLSCR1O15162 318 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 ETS1P14921 441 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 ITIH2P19823 946 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 MTM1Q13496 603 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 WDR44Q5JSH3 913 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 TAB3Q8N5C8 712 aaPredicted RBP18.36■□□□□ 0.53
SIPA1-209ENST00000534313 MIEF2Q96C03 454 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 SNX3O60493 162 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 ATF7P17544 494 aaPredicted RBP18.36■□□□□ 0.53
SIPA1-209ENST00000534313 ELF3P78545 371 aaPredicted RBP18.36■□□□□ 0.53
SIPA1-209ENST00000534313 ZNF394Q53GI3 561 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 TNFAIP8L3Q5GJ75 292 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 FAM182AQ5T1J6 154 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 IZUMO3Q5VZ72 239 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 TRIM68Q6AZZ1 485 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 TMC2Q8TDI7 906 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 ADAM22Q9P0K1 906 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.36■□□□□ 0.53
SIPA1-209ENST00000534313 COL4A5P29400 1685 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 TBC1D12O60347 775 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 BRDTQ58F21 947 aaPredicted RBP18.36■□□□□ 0.53
SIPA1-209ENST00000534313 FAM47EQ6ZV65 393 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 STAMBPL1Q96FJ0 436 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 TMEM109Q9BVC6 243 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 APOBEC3GQ9HC16 384 aaKnown RBP18.36■□□□□ 0.53
SIPA1-209ENST00000534313 NOD2Q9HC29 1040 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 PNMA3Q9UL41 463 aa18.36■□□□□ 0.53
SIPA1-209ENST00000534313 COL2A1P02458 1487 aaPredicted RBP18.36■□□□□ 0.53
SIPA1-209ENST00000534313 ZNF646O15015 1829 aaPredicted RBP18.36■□□□□ 0.53
SIPA1-209ENST00000534313 SPAG7O75391 227 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 KCNJ2P63252 427 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 PRKCEQ02156 737 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 XRCC4Q13426 336 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 TMED2Q15363 201 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 NAIF1Q69YI7 327 aaPredicted RBP18.35■□□□□ 0.53
SIPA1-209ENST00000534313 FBXL18Q96ME1 805 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 NSRP1Q9H0G5 558 aaKnown RBP18.35■□□□□ 0.53
SIPA1-209ENST00000534313 MCM8Q9UJA3 840 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.35■□□□□ 0.53
SIPA1-209ENST00000534313 ZNFX1Q9P2E3 1918 aaKnown RBP18.35■□□□□ 0.53
SIPA1-209ENST00000534313 PMM2O15305 246 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 PIAS1O75925 651 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 SFNP31947 248 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 PTK6Q13882 451 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 MFSD5Q6N075 450 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 ATL2Q8NHH9 583 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 NSMCE1Q8WV22 266 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 SPDL1Q96EA4 605 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 PCDHB2Q9Y5E7 798 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 RPL7AP62424 266 aaKnown RBP18.35■□□□□ 0.53
SIPA1-209ENST00000534313 ACCSLQ4AC99 568 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 OSBPL8Q9BZF1 889 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 FHDC1Q9C0D6 1143 aaPredicted RBP18.35■□□□□ 0.53
SIPA1-209ENST00000534313 TRIM33Q9UPN9 1127 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 NAALADL1Q9UQQ1 740 aa18.35■□□□□ 0.53
SIPA1-209ENST00000534313 LRRIQ4A6NIV6 560 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 TLR3O15455 904 aaKnown RBP18.34■□□□□ 0.53
SIPA1-209ENST00000534313 ZBED4O75132 1171 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 GCNT1Q02742 428 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 CXCL9Q07325 125 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 P3H1Q32P28 736 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 ZNF568Q3ZCX4 644 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 FAM167BQ9BTA0 163 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 ROPN1BQ9BZX4 212 aaPredicted RBP18.34■□□□□ 0.53
SIPA1-209ENST00000534313 HAPLN2Q9GZV7 340 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 ROPN1Q9HAT0 212 aaPredicted RBP18.34■□□□□ 0.53
SIPA1-209ENST00000534313 PGAP2Q9UHJ9 254 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 ZNF541Q9H0D2 1346 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 PEX10O60683 326 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 RGS20O76081 388 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 FDX1P10109 184 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 CALRP27797 417 aaKnown RBP18.34■□□□□ 0.53
SIPA1-209ENST00000534313 GNA15P30679 374 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 STX2P32856 288 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 ITIH4Q14624 930 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 USP37Q86T82 979 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 TTLL6Q8N841 843 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 KCNV2Q8TDN2 545 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 ZNF526Q8TF50 670 aaPredicted RBP18.34■□□□□ 0.53
SIPA1-209ENST00000534313 SERPINB12Q96P63 405 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 TRAIPQ9BWF2 469 aa18.34■□□□□ 0.53
SIPA1-209ENST00000534313 DNAJC8O75937 253 aaPredicted RBP18.33■□□□□ 0.53
SIPA1-209ENST00000534313 PROSCO94903 275 aa18.33■□□□□ 0.53
SIPA1-209ENST00000534313 VNN1O95497 513 aa18.33■□□□□ 0.53
SIPA1-209ENST00000534313 GHRP10912 638 aa18.33■□□□□ 0.53
SIPA1-209ENST00000534313 PSEN1P49768 467 aa18.33■□□□□ 0.53
SIPA1-209ENST00000534313 SNRPFP62306 86 aaKnown RBP18.33■□□□□ 0.53
SIPA1-209ENST00000534313 SNRNP48Q6IEG0 339 aaKnown RBP18.33■□□□□ 0.53
SIPA1-209ENST00000534313 TMEM174Q8WUU8 243 aa18.33■□□□□ 0.53
SIPA1-209ENST00000534313 IFT74Q96LB3 600 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms