RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 FBXO43Q4G163 708 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 COLEC12Q5KU26 742 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 CCDC82Q8N4S0 544 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 SPATA18Q8TC71 538 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 PRPF31Q8WWY3 499 aaKnown RBP11.74□□□□□ -0.53
CSDE1-215ENST00000533818 ACDQ96AP0 544 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 JPH2Q9BR39 696 aaPredicted RBP11.74□□□□□ -0.53
CSDE1-215ENST00000533818 DSCC1Q9BVC3 393 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 FBRSL1Q9HCM7 1045 aaKnown RBP11.74□□□□□ -0.53
CSDE1-215ENST00000533818 DNAAF2Q9NVR5 837 aaKnown RBP11.74□□□□□ -0.53
CSDE1-215ENST00000533818 KIAA1522Q9P206 1035 aaPredicted RBP11.74□□□□□ -0.53
CSDE1-215ENST00000533818 CEP72Q9P209 647 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 PILRBQ9UKJ0 227 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 ATXN2Q99700 1313 aaKnown RBP11.74□□□□□ -0.53
CSDE1-215ENST00000533818 THADAQ6YHU6 1953 aa11.74□□□□□ -0.53
CSDE1-215ENST00000533818 SPTAN1Q13813 2472 aaKnown RBP11.74□□□□□ -0.53
CSDE1-215ENST00000533818 A0A1W2PRU2 124 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 VWA8A3KMH1 1905 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 CHMP2AO43633 222 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 TSPAN1O60635 241 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 KRT38O76015 456 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 SERPINF2P08697 491 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 DRD1P21728 446 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 ITPKAP23677 461 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 SETQ01105 290 aaPredicted RBP11.73□□□□□ -0.53
CSDE1-215ENST00000533818 AP3B2Q13367 1082 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 LYSMD4Q5XG99 296 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 ANO7Q6IWH7 933 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 NAXDQ8IW45 347 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 TEX2Q8IWB9 1127 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
CSDE1-215ENST00000533818 CEP76Q8TAP6 659 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 THG1LQ9NWX6 298 aaKnown RBP11.73□□□□□ -0.53
CSDE1-215ENST00000533818 DNMT3LQ9UJW3 386 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 TPCN1Q9ULQ1 816 aa11.73□□□□□ -0.53
CSDE1-215ENST00000533818 CIZ1Q9ULV3 898 aaPredicted RBP11.73□□□□□ -0.53
CSDE1-215ENST00000533818 ATMQ13315 3056 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 SALL3Q9BXA9 1300 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 ARHGAP33O14559 1287 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 SLC28A2O43868 658 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 DDAH1O94760 285 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 STBD1O95210 358 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 CYP3A4P08684 503 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 TKTP29401 623 aaKnown RBP11.72□□□□□ -0.53
CSDE1-215ENST00000533818 HOXD12P35452 270 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 EIF2S3P41091 472 aaKnown RBP11.72□□□□□ -0.53
CSDE1-215ENST00000533818 GALK1P51570 392 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 ADCY7P51828 1080 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 NAPAP54920 295 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 LAMTOR4Q0VGL1 99 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 TWF1Q12792 350 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 PSMD2Q13200 908 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 CAMK2BQ13554 666 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 PRR16Q569H4 304 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 SLC8B1Q6J4K2 584 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 GLRX5Q86SX6 157 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 RASSF3Q86WH2 238 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 ZNF654Q8IZM8 581 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 GALNT15Q8N3T1 639 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 BPIFB1Q8TDL5 484 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 RILPL2Q969X0 211 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 DDX27Q96GQ7 796 aaKnown RBP11.72□□□□□ -0.53
CSDE1-215ENST00000533818 CNOT6LQ96LI5 555 aaKnown RBP11.72□□□□□ -0.53
CSDE1-215ENST00000533818 FNBP1Q96RU3 617 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 CAPN10Q9HC96 672 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 GKN1Q9NS71 199 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 OBP2AQ9NY56 170 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 ATG2BQ96BY7 2078 aa11.72□□□□□ -0.53
CSDE1-215ENST00000533818 TDRD15B5MCY1 1934 aaKnown RBP11.72□□□□□ -0.53
CSDE1-215ENST00000533818 COL6A6A6NMZ7 2263 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 MGAQ8IWI9 3026 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 GON4LQ3T8J9 2241 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 ERVH48-1M5A8F1 160 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 RRP8O43159 456 aaKnown RBP11.71□□□□□ -0.53
CSDE1-215ENST00000533818 PRKCBP05771 671 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 THP07101 528 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 CALM1P0DP23 149 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 CALM2P0DP24 149 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 CALM3P0DP25 149 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 SDSP20132 328 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 SFNP31947 248 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 JAK3P52333 1124 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 AMPD2Q01433 879 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 RUNX3Q13761 415 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 PCBP1Q15365 356 aaKnown RBP eCLIP11.71□□□□□ -0.53
CSDE1-215ENST00000533818 STXBP5Q5T5C0 1151 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 WWC2Q6AWC2 1192 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 CWC27Q6UX04 472 aaKnown RBP11.71□□□□□ -0.53
CSDE1-215ENST00000533818 TTC30AQ86WT1 665 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 SPRYD3Q8NCJ5 442 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 IGDCC4Q8TDY8 1250 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 PSPC1Q8WXF1 523 aaKnown RBP11.71□□□□□ -0.53
CSDE1-215ENST00000533818 RLN3Q8WXF3 142 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 TMEM143Q96AN5 459 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 CHFRQ96EP1 664 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 NOTCH2Q04721 2471 aa11.71□□□□□ -0.53
CSDE1-215ENST00000533818 PTPRQQ9UMZ3 2332 aa11.7□□□□□ -0.54
CSDE1-215ENST00000533818 UBR5O95071 2799 aaPredicted RBP11.7□□□□□ -0.54
CSDE1-215ENST00000533818 FAM149AA5PLN7 773 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms