RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 CD4P01730 458 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 RPLP2P05387 115 aaKnown RBP8.54□□□□□ -1.04
CASP4-212ENST00000533730 LIG1P18858 919 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 STAT5BP51692 787 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 PPP2R5CQ13362 524 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 BECN1Q14457 450 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 MBTPS1Q14703 1052 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 CALCRLQ16602 461 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 RILPL1Q5EBL4 403 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 TTC38Q5R3I4 469 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 TDRD10Q5VZ19 366 aaKnown RBP8.54□□□□□ -1.04
CASP4-212ENST00000533730 ABHD15Q6UXT9 468 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 PPFIBP1Q86W92 1011 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 C12orf40Q86WS4 652 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 TMEM130Q8N3G9 435 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 AFAP1L1Q8TED9 768 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 RELTQ969Z4 430 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 ACSF2Q96CM8 615 aaPredicted RBP8.54□□□□□ -1.04
CASP4-212ENST00000533730 LBHD1Q9BQE6 289 aaPredicted RBP8.54□□□□□ -1.04
CASP4-212ENST00000533730 AARSD1Q9BTE6 412 aaKnown RBP8.54□□□□□ -1.04
CASP4-212ENST00000533730 MRPL4Q9BYD3 311 aaKnown RBP8.54□□□□□ -1.04
CASP4-212ENST00000533730 ASPSCR1Q9BZE9 553 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 PDLIM7Q9NR12 457 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 DISC1Q9NRI5 854 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 GTF2IRD1Q9UHL9 959 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 ADAM30Q9UKF2 790 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 TBX21Q9UL17 535 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 ALPK3Q96L96 1907 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 NRCAMQ92823 1304 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 C17orf102A2RUQ5 167 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 VPS37CA5D8V6 355 aaPredicted RBP8.53□□□□□ -1.04
CASP4-212ENST00000533730 RRN3P2A6NIE6 340 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 KIF28PB7ZC32 967 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 H0YGN5 161 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 LAD1O00515 517 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 B4GALT4O60513 344 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 RASGRP1O95267 797 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 WISP1O95388 367 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 EYA4O95677 639 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 PROCP04070 461 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 TP53P04637 393 aaPredicted RBP8.53□□□□□ -1.04
CASP4-212ENST00000533730 SMIM10L2AP0DMW4 78 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 SMIM10L2BP0DMW5 78 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 HOXC8P31273 242 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 MCM7P33993 719 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 GNALP38405 381 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 ARL4DP49703 201 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 PPP2R2AP63151 447 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 NRG1Q02297 640 aaPredicted RBP8.53□□□□□ -1.04
CASP4-212ENST00000533730 MCL1Q07820 350 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 BFSP2Q13515 415 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 HSP90AA2PQ14568 343 aaPredicted RBP8.53□□□□□ -1.04
CASP4-212ENST00000533730 PTGISQ16647 500 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 MAP9Q49MG5 647 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 MIER3Q7Z3K6 550 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 CAGE1Q8TC20 777 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 LEO1Q8WVC0 666 aaPredicted RBP8.53□□□□□ -1.04
CASP4-212ENST00000533730 ATP6V0A1Q93050 837 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 FAM167AQ96KS9 214 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 LGR4Q9BXB1 951 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 MRPL18Q9H0U6 180 aaKnown RBP8.53□□□□□ -1.04
CASP4-212ENST00000533730 UNC45AQ9H3U1 944 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 PRDM5Q9NQX1 630 aaPredicted RBP8.53□□□□□ -1.04
CASP4-212ENST00000533730 ZNF302Q9NR11 478 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 INTS7Q9NVH2 962 aaKnown RBP8.53□□□□□ -1.04
CASP4-212ENST00000533730 HDAC6Q9UBN7 1215 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 PCDHA12Q9UN75 941 aa8.53□□□□□ -1.04
CASP4-212ENST00000533730 COL1A2P08123 1366 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 DOCK5Q9H7D0 1870 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 ANKRD34BA5PLL1 514 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 CHMP2AO43633 222 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 HBP1O60381 514 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 DNAJC8O75937 253 aaPredicted RBP8.52□□□□□ -1.05
CASP4-212ENST00000533730 SCGB1D2O95969 90 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 BMP15O95972 392 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 TIMP1P01033 207 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 EPHX1P07099 455 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 OR52Z1P0C646 297 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 NAT2P11245 290 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 SYT1P21579 422 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 ZNF143P52747 638 aaPredicted RBP8.52□□□□□ -1.05
CASP4-212ENST00000533730 PPFIA1Q13136 1202 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 TMEM266Q2M3C6 531 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 BBS9Q3SYG4 887 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 SWSAP1Q6NVH7 229 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 TAF2Q6P1X5 1199 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 B3GNT9Q6UX72 402 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 CCDC60Q8IWA6 550 aaPredicted RBP8.52□□□□□ -1.05
CASP4-212ENST00000533730 SCUBE1Q8IWY4 988 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 TMEM192Q8IY95 271 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 TMEM199Q8N511 208 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 FAM13CQ8NE31 585 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 NEK9Q8TD19 979 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 ATP8B4Q8TF62 1192 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 DDX1Q92499 740 aaKnown RBP8.52□□□□□ -1.05
CASP4-212ENST00000533730 HAS1Q92839 578 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 PPP1R14AQ96A00 147 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 SLC6A18Q96N87 628 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 MTMR9Q96QG7 549 aa8.52□□□□□ -1.05
CASP4-212ENST00000533730 PCYT2Q99447 389 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms