RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 DENND2CQ68D51 928 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 ANKS1BQ7Z6G8 1248 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 ZBTB33Q86T24 672 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 TRIM50Q86XT4 487 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 ADAM22Q9P0K1 906 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 R3HDM2Q9Y2K5 976 aaKnown RBP16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 PASKQ96RG2 1323 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 IRF6O14896 467 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 SLC1A1P43005 524 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 KRT17Q04695 432 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 PPP1R7Q15435 360 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 HSDL1Q3SXM5 330 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 MMS22LQ6ZRQ5 1243 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 MDM1Q8TC05 714 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 SEPT1Q8WYJ6 367 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 SLCO2A1Q92959 643 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 TRIM11Q96F44 468 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 PAGR1Q9BTK6 254 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 HEMGNQ9BXL5 484 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 PARP2Q9UGN5 583 aa16.34■□□□□ 0.21
CACNA1E-208ENST00000533229 TLDC2A0PJX2 215 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 ADM5C9JUS6 153 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 THAP12O43422 761 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 PGK2P07205 417 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 NF2P35240 595 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 NEDD9Q14511 834 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 METTL7BQ6UX53 244 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 GADL1Q6ZQY3 521 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 LRRC71Q8N4P6 559 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 RUNDC3BQ96NL0 473 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 PLVAPQ9BX97 442 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 FAM107BQ9H098 131 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 AAASQ9NRG9 546 aa16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 MTRF1LQ9UGC7 380 aaKnown RBP16.33■□□□□ 0.21
CACNA1E-208ENST00000533229 SMIM23A6NLE4 172 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 ZBTB42B2RXF5 422 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 RIPK2O43353 540 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 TRAPPC3O43617 180 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 CNMDO75829 334 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 FAM107AO95990 144 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 SRGAP2CP0DJJ0 459 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 RARGP13631 454 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 IVDP26440 423 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 GBP1P32455 592 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 TRIP13Q15645 432 aaPredicted RBP16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 PLEKHA7Q6IQ23 1121 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 PHF13Q86YI8 300 aaPredicted RBP16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 UBR7Q8N806 425 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 ZNF606Q8WXB4 792 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 FAM118BQ9BPY3 351 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 MTMR12Q9C0I1 747 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 CCDC113Q9H0I3 377 aa16.33■□□□□ 0.2
CACNA1E-208ENST00000533229 LOC285556D6RIA3 1793 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 DDNO94850 711 aaPredicted RBP16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 RALAP11233 206 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 TBXAS1P24557 533 aaPredicted RBP16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 MAGEA9P43362 315 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 ZNF132P52740 706 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 IFI35P80217 286 aaPredicted RBP16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 KLF1Q13351 362 aaPredicted RBP16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 ZNF568Q3ZCX4 644 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 TMEM63BQ5T3F8 832 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 FAM160B1Q5W0V3 765 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 ZPBP2Q6X784 338 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 BRSK2Q8IWQ3 736 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 ZNF668Q96K58 619 aaPredicted RBP16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 FGD4Q96M96 766 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 TCHPQ9BT92 498 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 DCLK3Q9C098 648 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 TXNRD2Q9NNW7 524 aa16.32■□□□□ 0.2
CACNA1E-208ENST00000533229 ABLIM1O14639 778 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 TLR3O15455 904 aaKnown RBP16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 TOM1L1O75674 476 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 ASS1P00966 412 aaKnown RBP16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 TGFB3P10600 412 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 TCF4P15884 667 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 MYL6P60660 151 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 RPL7AP62424 266 aaKnown RBP16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 LAMTOR4Q0VGL1 99 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 BYSLQ13895 437 aaKnown RBP16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 TRIM72Q6ZMU5 477 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 HOOK3Q86VS8 718 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 CCDC25Q86WR0 208 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 RNF149Q8NC42 400 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 EPS8L3Q8TE67 593 aaKnown RBP16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 RAPGEF5Q92565 580 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 ZBTB10Q96DT7 871 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 FAM212AQ96EL1 285 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 PGM2Q96G03 612 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 ACO2Q99798 780 aaKnown RBP16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 AZI2Q9H6S1 392 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 ELP3Q9H9T3 547 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 MYH9P35579 1960 aaKnown RBP16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 GMNCA6NCL1 334 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 SRRM3A6NNA2 597 aaPredicted RBP16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 GJB1P08034 283 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 CHKAP35790 457 aa16.31■□□□□ 0.2
CACNA1E-208ENST00000533229 SLCO1A2P46721 670 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms