RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 RESP18Q5W5W9 173 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 RNF43Q68DV7 783 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 CAVIN1Q6NZI2 390 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 CCDC73Q6ZRK6 1079 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 CACNA2D4Q7Z3S7 1137 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 WDR5BQ86VZ2 330 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 MAP4K3Q8IVH8 894 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 PRPF31Q8WWY3 499 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 TMEM121BQ9BXQ6 578 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 EIF2AQ9BY44 585 aaKnown RBP12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 TRIM6Q9C030 488 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 HES2Q9Y543 173 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 PCDHGA5Q9Y5G8 931 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 GREB1Q4ZG55 1949 aa12.42□□□□□ -0.42
TRAPPC4-213ENST00000533149 FAM237AA0A1B0GTK4 181 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 ASAP2O43150 1006 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 MARCH6O60337 910 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 MICAL2O94851 1124 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 PTPN2P17706 415 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 FCARP24071 287 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 CCNE1P24864 410 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 GDI1P31150 447 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 TXKP42681 527 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 RAP1GAPP47736 663 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 NDUFA8P51970 172 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 LAMTOR4Q0VGL1 99 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 GAS6Q14393 721 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 CCDC6Q16204 474 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 SLC5A9Q2M3M2 681 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 USP49Q70CQ1 688 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 ANO5Q75V66 913 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 GSTCDQ8NEC7 633 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 ENGASEQ8NFI3 743 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 RABGGTAQ92696 567 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 APOL6Q9BWW8 343 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 GZF1Q9H116 711 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 VPS45Q9NRW7 570 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 FAM13BQ9NYF5 915 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 WASF3Q9UPY6 502 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 PPME1Q9Y570 386 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 ZMYM2Q9UBW7 1377 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 TDRD15B5MCY1 1934 aaKnown RBP12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 TCHHQ07283 1943 aa12.41□□□□□ -0.42
TRAPPC4-213ENST00000533149 ZNF197O14709 1029 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 ZNF263O14978 683 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 TSPAN1O60635 241 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 PFKFB1P16118 471 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 CEBPBP17676 345 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 OR1D2P34982 312 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 LONP1P36776 959 aaKnown RBP12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 PSMC5P62195 406 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 FAM160A1Q05DH4 1040 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 SPIRE1Q08AE8 756 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 ZNF252P-AS1Q0IIN9 211 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 FAM78AQ5JUQ0 283 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 DGKKQ5KSL6 1271 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 PLA2G2CQ5R387 149 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 FMR1NBQ8N0W7 255 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 RNF149Q8NC42 400 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 DEPDC1BQ8WUY9 529 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 TCP11Q8WWU5 503 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 GAB3Q8WWW8 586 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 ZCCHC14Q8WYQ9 949 aaKnown RBP12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 HAS1Q92839 578 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 GATA6Q92908 595 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 KIF12Q96FN5 646 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 EPSTI1Q96J88 318 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 PANK2Q9BZ23 570 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 TMEM63CQ9P1W3 806 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 HPSEQ9Y251 543 aa12.4□□□□□ -0.42
TRAPPC4-213ENST00000533149 TAF4O00268 1085 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 ADAM12O43184 909 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 DKC1O60832 514 aaKnown RBP eCLIP12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 RPP40O75818 363 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 PSMD10O75832 226 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 RFC5P40937 340 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 TUSC3Q13454 348 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 DAB2IPQ5VWQ8 1189 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 PLA2G4FQ68DD2 849 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 CSGALNACT1Q8TDX6 532 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 SMARCD2Q92925 531 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 GJA10Q969M2 543 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 SYAP1Q96A49 352 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 TMEM143Q96AN5 459 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 FAM20AQ96MK3 541 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 ASB16Q96NS5 453 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 ANP32EQ9BTT0 268 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 NXF3Q9H4D5 531 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 C8orf33Q9H7E9 229 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 KCNMB3Q9NPA1 279 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 DDX19AQ9NUU7 478 aaKnown RBP12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 NOTCH4Q99466 2003 aa12.39□□□□□ -0.43
TRAPPC4-213ENST00000533149 F5P12259 2224 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 CCDC163A0A0D9SF12 145 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 TBX3O15119 743 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 AKAP3O75969 853 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 ZNF202O95125 648 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 LRG1P02750 347 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 CEACAM1P13688 526 aa12.38□□□□□ -0.43
TRAPPC4-213ENST00000533149 SPINK2P20155 84 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms