RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 NBPF20Q3BBV1 942 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 EPC2Q52LR7 807 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 ATG16L1Q676U5 607 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 APBB1IPQ7Z5R6 666 aaPredicted RBP9.95□□□□□ -0.82
BDNF-216ENST00000532997 KIRREL3Q8IZU9 778 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 SMC1BQ8NDV3 1235 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 CYP2W1Q8TAV3 490 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 DEPTORQ8TB45 409 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 FERMT1Q9BQL6 677 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 VCX3AQ9NNX9 186 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 SAR1AQ9NR31 198 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 HAO1Q9UJM8 370 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 NENFQ9UMX5 172 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 PHLPP1O60346 1717 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 ABLIM1O14639 778 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 ZBED4O75132 1171 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 LDHAP00338 332 aaKnown RBP9.95□□□□□ -0.82
BDNF-216ENST00000532997 GNA15P30679 374 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 HOXD13P35453 343 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 PPP3CAQ08209 521 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 MORF4L2Q15014 288 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 SLFN12LQ6IEE8 588 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 NLRP9Q7RTR0 991 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 ERICH1Q86X53 443 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 CTAGE3PQ8IX95 158 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 C4orf33Q8N1A6 199 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 SUPT20HQ8NEM7 779 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 CCDC110Q8TBZ0 833 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 CERKQ8TCT0 537 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 PRCCQ92733 491 aaPredicted RBP9.95□□□□□ -0.82
BDNF-216ENST00000532997 ZDHHC15Q96MV8 337 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 DBNDD1Q9H9R9 158 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 ARHGEF3Q9NR81 526 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 MTO1Q9Y2Z2 717 aaKnown RBP9.95□□□□□ -0.82
BDNF-216ENST00000532997 SHANK3Q9BYB0 1731 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 TESPA1A2RU30 521 aaPredicted RBP9.94□□□□□ -0.82
BDNF-216ENST00000532997 MCF2LO15068 1137 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 PEX5P50542 639 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 YWHAGP61981 247 aaKnown RBP eCLIP9.94□□□□□ -0.82
BDNF-216ENST00000532997 NFIAQ12857 509 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 BBS9Q3SYG4 887 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 LVRNQ6Q4G3 990 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 ZC3H18Q86VM9 953 aaKnown RBP9.94□□□□□ -0.82
BDNF-216ENST00000532997 ARHGAP18Q8N392 663 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 ZCCHC9Q8N567 271 aaKnown RBP9.94□□□□□ -0.82
BDNF-216ENST00000532997 ZNF398Q8TD17 642 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 RILPQ96NA2 401 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 SENP7Q9BQF6 1050 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 MYLK2Q9H1R3 596 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 CHST7Q9NS84 486 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 ANKEF1Q9NU02 776 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 CYP39A1Q9NYL5 469 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 ZNF219Q9P2Y4 722 aaPredicted RBP9.94□□□□□ -0.82
BDNF-216ENST00000532997 DCTN4Q9UJW0 460 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 ACADSP16219 412 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 CD58P19256 250 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 ECE1P42892 770 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 MCL1Q07820 350 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 TBC1D10BQ4KMP7 808 aaPredicted RBP9.94□□□□□ -0.82
BDNF-216ENST00000532997 EAPPQ56P03 285 aaPredicted RBP9.94□□□□□ -0.82
BDNF-216ENST00000532997 ARHGEF16Q5VV41 709 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 MCOLN2Q8IZK6 566 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 TMEM35BQ8NCS4 154 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 LRMDAQ9H2I8 198 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 RANBP17Q9H2T7 1088 aaKnown RBP9.94□□□□□ -0.82
BDNF-216ENST00000532997 NPHS2Q9NP85 383 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 CTNNAL1Q9UBT7 734 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 CFAP69A5D8W1 941 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 BHMG1C9JSJ3 638 aaPredicted RBP9.94□□□□□ -0.82
BDNF-216ENST00000532997 RNF8O76064 485 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 FMO1Q01740 532 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 GCNT1Q02742 428 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 MAP3K21Q5TCX8 1036 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 LDHDQ86WU2 507 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 PALB2Q86YC2 1186 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 CDAN1Q8IWY9 1227 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 CPA5Q8WXQ8 436 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 CNKSR1Q969H4 720 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 TSSK1BQ9BXA7 367 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 C17orf75Q9HAS0 396 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 PNMA3Q9UL41 463 aa9.94□□□□□ -0.82
BDNF-216ENST00000532997 DNALI1O14645 258 aaPredicted RBP9.93□□□□□ -0.82
BDNF-216ENST00000532997 CTCFP49711 727 aaPredicted RBP9.93□□□□□ -0.82
BDNF-216ENST00000532997 GPC3P51654 580 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 GEMIN4P57678 1058 aaKnown RBP9.93□□□□□ -0.82
BDNF-216ENST00000532997 NFX1Q12986 1120 aaKnown RBP9.93□□□□□ -0.82
BDNF-216ENST00000532997 MKRN4PQ13434 485 aaPredicted RBP9.93□□□□□ -0.82
BDNF-216ENST00000532997 DLGAP5Q15398 846 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 SLC45A4Q5BKX6 768 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 RASIP1Q5U651 963 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 TMEM270Q6UE05 265 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 BORCS6Q96GS4 357 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 NSL1Q96IY1 281 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 FAM213AQ9BRX8 229 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 GINM1Q9NU53 330 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 TBX20Q9UMR3 447 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.93□□□□□ -0.82
BDNF-216ENST00000532997 SHOC2Q9UQ13 582 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 LPXNO60711 386 aa9.93□□□□□ -0.82
BDNF-216ENST00000532997 KRT37O76014 449 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms