RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 CD302Q8IX05 232 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 PPM1KQ8N3J5 372 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 EHBP1Q8NDI1 1231 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 GANQ9H2C0 597 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 APOBEC3GQ9HC16 384 aaKnown RBP11.47□□□□□ -0.57
SOX6-213ENST00000530378 TBC1D13Q9NVG8 400 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 GBF1Q92538 1859 aa11.47□□□□□ -0.57
SOX6-213ENST00000530378 ABHD14A-ACY1A0A1B0GW23 586 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 GTPBP10A4D1E9 387 aaKnown RBP11.46□□□□□ -0.57
SOX6-213ENST00000530378 FGBP02675 491 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 AMHP03971 560 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 PTMAP06454 111 aaKnown RBP11.46□□□□□ -0.57
SOX6-213ENST00000530378 RAP1GAPP47736 663 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 FXR1P51114 621 aaKnown RBP eCLIP11.46□□□□□ -0.57
SOX6-213ENST00000530378 AP3M2P53677 418 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 ADKP55263 362 aaKnown RBP11.46□□□□□ -0.57
SOX6-213ENST00000530378 NAB2Q15742 525 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 ZBTB6Q15916 424 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 TMEM240Q5SV17 173 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 C9orf57Q5W0N0 161 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 IQCEQ6IPM2 695 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 PHLDB3Q6NSJ2 640 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 DPY19L2P1Q6NXN4 242 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.46□□□□□ -0.57
SOX6-213ENST00000530378 PPFIBP1Q86W92 1011 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 NPAS4Q8IUM7 802 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 CXorf38Q8TB03 319 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 URGCPQ8TCY9 931 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 NXF1Q9UBU9 619 aaKnown RBP11.46□□□□□ -0.57
SOX6-213ENST00000530378 DNAJB4Q9UDY4 337 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 ITGA11Q9UKX5 1188 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.57
SOX6-213ENST00000530378 NUB1Q9Y5A7 615 aa11.46□□□□□ -0.57
SOX6-213ENST00000530378 I3L4J1 428 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 P4HA2O15460 535 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.58
SOX6-213ENST00000530378 DDHD2O94830 711 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 PFKMP08237 780 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 UCHL3P15374 230 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 MAGEA10P43363 369 aaPredicted RBP11.46□□□□□ -0.58
SOX6-213ENST00000530378 CLCNKBP51801 687 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 MCCD1P59942 119 aaPredicted RBP11.46□□□□□ -0.58
SOX6-213ENST00000530378 POU5F1Q01860 360 aaKnown RBP11.46□□□□□ -0.58
SOX6-213ENST00000530378 ENPEPQ07075 957 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 GRIK3Q13003 919 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 KLHDC7AQ5VTJ3 777 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 CACNA2D4Q7Z3S7 1137 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 C3orf58Q8NDZ4 430 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 HPDLQ96IR7 371 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 NT5C1BQ96P26 610 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 CASD1Q96PB1 797 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 IMPG2Q9BZV3 1241 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 UBE2TQ9NPD8 197 aaPredicted RBP11.46□□□□□ -0.58
SOX6-213ENST00000530378 UBN1Q9NPG3 1134 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 APEX2Q9UBZ4 518 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 PRG3Q9Y2Y8 225 aaPredicted RBP11.46□□□□□ -0.58
SOX6-213ENST00000530378 DERAQ9Y315 318 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 COQ4Q9Y3A0 265 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 ITIH6Q6UXX5 1313 aa11.46□□□□□ -0.58
SOX6-213ENST00000530378 FAM170AA1A519 330 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 PODXLO00592 558 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 ASS1P00966 412 aaKnown RBP11.45□□□□□ -0.58
SOX6-213ENST00000530378 CD58P19256 250 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 RBP5P82980 135 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 ARID5AQ03989 594 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 CCDC173Q0VFZ6 552 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 WDR72Q3MJ13 1102 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 WDR44Q5JSH3 913 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 C9orf50Q5SZB4 431 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 PSRC1Q6PGN9 363 aaPredicted RBP11.45□□□□□ -0.58
SOX6-213ENST00000530378 CCDC186Q7Z3E2 898 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 NT5DC4Q86YG4 428 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 CRIPAKQ8N1N5 446 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 CCDC150Q8NCX0 1101 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 PDLIM2Q96JY6 352 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 TTYH3Q9C0H2 523 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 XYLT2Q9H1B5 865 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 ELAC1Q9H777 363 aaKnown RBP11.45□□□□□ -0.58
SOX6-213ENST00000530378 SMYD3Q9H7B4 428 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 SLC38A7Q9NVC3 462 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 DNAJC12Q9UKB3 198 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 CDH23Q9H251 3354 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 TSC2P49815 1807 aa11.45□□□□□ -0.58
SOX6-213ENST00000530378 LRRC53A6NM62 1247 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 SPTLC1O15269 473 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 XPOTO43592 962 aaKnown RBP11.44□□□□□ -0.58
SOX6-213ENST00000530378 BAIAP3O94812 1187 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 CALCAP01258 141 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 ITGB1P05556 798 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 DEKP35659 375 aaKnown RBP11.44□□□□□ -0.58
SOX6-213ENST00000530378 USP8P40818 1118 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 OR1G1P47890 313 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 BCAR1P56945 870 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 TBX2Q13207 712 aaPredicted RBP11.44□□□□□ -0.58
SOX6-213ENST00000530378 ORC1Q13415 861 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 E4F1Q66K89 784 aaPredicted RBP11.44□□□□□ -0.58
SOX6-213ENST00000530378 KREMEN1Q96MU8 473 aa11.44□□□□□ -0.58
SOX6-213ENST00000530378 FAM193BQ96PV7 902 aaPredicted RBP11.44□□□□□ -0.58
SOX6-213ENST00000530378 CEP72Q9P209 647 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms