RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 FBXO4Q9UKT5 387 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 GPR179Q6PRD1 2367 aa9.41□□□□□ -0.9
TGFBR3-208ENST00000529608 NCANO14594 1321 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 STK36Q9NRP7 1315 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 VPS37CA5D8V6 355 aaPredicted RBP9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 LRRIQ4A6NIV6 560 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 LAMTOR5O43504 91 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 MARCH6O60337 910 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 TDGF1P13385 188 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 CEBPBP17676 345 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 FGFR3P22607 806 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 FCARP24071 287 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 TKTP29401 623 aaKnown RBP9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 HOXA9P31269 272 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 TXKP42681 527 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 BRCC3P46736 316 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 CLCNKBP51801 687 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 KRT85P78386 507 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 CREMQ03060 361 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 NCBP1Q09161 790 aaKnown RBP9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 GLRA4Q5JXX5 417 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 LIN9Q5TKA1 542 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 CDCA2Q69YH5 1023 aaPredicted RBP9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 TANGO2Q6ICL3 276 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 LRSAM1Q6UWE0 723 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 TPRG1Q6ZUI0 275 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 MTSS1LQ765P7 747 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 SLFN12Q8IYM2 578 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 FAM177A1Q8N128 213 aaPredicted RBP9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 FAM184AQ8NB25 1140 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 RDH13Q8NBN7 331 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 ANP32BQ92688 251 aaKnown RBP9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 SHDQ96IW2 340 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 MTMR9Q96QG7 549 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 TMUB1Q9BVT8 246 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 BCO2Q9BYV7 579 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 OSBPL6Q9BZF3 934 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 CCDC113Q9H0I3 377 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 TMEM60Q9H2L4 133 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 TTC12Q9H892 705 aaPredicted RBP9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 NCDNQ9UBB6 729 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 MTRRQ9UBK8 725 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 PCDHA12Q9UN75 941 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 CDY1Q9Y6F8 540 aa9.4□□□□□ -0.9
TGFBR3-208ENST00000529608 NCOR2Q9Y618 2525 aa9.4□□□□□ -0.91
TGFBR3-208ENST00000529608 DCDC2BA2VCK2 349 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 SPTLC1O15269 473 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 MED24O75448 989 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 THP07101 528 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 POU2F2P09086 479 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 HOXC13P31276 330 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 CCR2P41597 374 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 SOX4Q06945 474 aaPredicted RBP9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 MTAPQ13126 283 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 FAM187BQ17R55 369 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 PABPC1LQ4VXU2 614 aaKnown RBP9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 PRSS36Q5K4E3 855 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 ATL3Q6DD88 541 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 GAS2L3Q86XJ1 694 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 CATSPER3Q86XQ3 398 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 HACE1Q8IYU2 909 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 TMEM130Q8N3G9 435 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 CEP120Q8N960 986 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 KRI1Q8N9T8 703 aaKnown RBP9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 TCEAL4Q96EI5 215 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 PPP1R10Q96QC0 940 aaKnown RBP9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 KIFC3Q9BVG8 833 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 SCAND2PQ9GZW5 306 aaPredicted RBP9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 EPC1Q9H2F5 836 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 PRMT8Q9NR22 394 aaPredicted RBP9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 PRMT7Q9NVM4 692 aaPredicted RBP9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 SMG5Q9UPR3 1016 aaKnown RBP9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 GDAQ9Y2T3 454 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 PCDHGA2Q9Y5H1 932 aa9.39□□□□□ -0.91
TGFBR3-208ENST00000529608 KIF26AQ9ULI4 1882 aaPredicted RBP9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 WDR27A2RRH5 827 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 BTBD18B2RXH4 712 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 H3BQV1 296 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 MEFVO15553 781 aaPredicted RBP9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 MOSPD3O75425 235 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 ECI2O75521 394 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 SEC24AO95486 1093 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 RHOP08100 348 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 ROR1Q01973 937 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 GRM2Q14416 872 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 CALCRLQ16602 461 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 LPAL2Q16609 132 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 UVSSAQ2YD98 709 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 WDR44Q5JSH3 913 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 ZBTB41Q5SVQ8 909 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 NT5DC1Q5TFE4 455 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 CPLX2Q6PUV4 134 aaKnown RBP9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 NSUN7Q8NE18 718 aaKnown RBP9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 PRIMPOLQ96LW4 560 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 ZSWIM3Q96MP5 696 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 ZSCAN32Q9NX65 697 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 TMEM63CQ9P1W3 806 aa9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 MRPS23Q9Y3D9 190 aaKnown RBP9.38□□□□□ -0.91
TGFBR3-208ENST00000529608 TMEM189-UBE2V1I3L0A0 370 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms