RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 GBP2P32456 591 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 CNR2P34972 360 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 PPM1AP35813 382 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 RFC5P40937 340 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 RARRES1P49788 294 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 POLGP54098 1239 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 EMC2Q15006 297 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 IL17AQ16552 155 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 FAM102BQ5T8I3 360 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 SH3PXD2AQ5TCZ1 1133 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 MCTP1Q6DN14 999 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 CABP7Q86V35 215 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 ZNF410Q86VK4 478 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 EXOC8Q8IYI6 725 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 ZNF843Q8N446 348 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 CMASQ8NFW8 434 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 PIGOQ8TEQ8 1089 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 PRPF31Q8WWY3 499 aaKnown RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 SLC7A3Q8WY07 619 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 LRIG1Q96JA1 1093 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 IER2Q9BTL4 223 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 POLR3CQ9BUI4 534 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 GCOM2Q9BZD3 368 aaPredicted RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 ELAC1Q9H777 363 aaKnown RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 WDR6Q9NNW5 1121 aaKnown RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 TUFT1Q9NNX1 390 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 LRFN2Q9ULH4 789 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 COL4A3BPQ9Y5P4 624 aa9.38□□□□□ -0.91
SSBP3-212ENST00000528930 URB1O60287 2271 aaKnown RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 CLUHO75153 1309 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 CACNA1EQ15878 2313 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 DOPEY2Q9Y3R5 2298 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 DENND3A2RUS2 1198 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 TBKBP1A7MCY6 615 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 H3BQV1 296 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 ATXN7O15265 892 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-212ENST00000528930 ASAP2O43150 1006 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 GAS2O43903 313 aaKnown RBP9.37□□□□□ -0.91
SSBP3-212ENST00000528930 RPA1P27694 616 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 ARL2P36404 184 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 ANP32AP39687 249 aaKnown RBP9.37□□□□□ -0.91
SSBP3-212ENST00000528930 GPC5P78333 572 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 KRT17Q04695 432 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 LAMTOR4Q0VGL1 99 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 SRSF5Q13243 272 aaKnown RBP9.37□□□□□ -0.91
SSBP3-212ENST00000528930 PDIA5Q14554 519 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 ECM1Q16610 540 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 RILPL1Q5EBL4 403 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 C6orf118Q5T5N4 469 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 RNF43Q68DV7 783 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 KCNT2Q6UVM3 1135 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 IGSF22Q8N9C0 903 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 TCP11Q8WWU5 503 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 NLRP4Q96MN2 994 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 NELL2Q99435 816 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 INO80BQ9C086 356 aaPredicted RBP9.37□□□□□ -0.91
SSBP3-212ENST00000528930 CHRDQ9H2X0 955 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 MINDY3Q9H8M7 445 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 RNF19AQ9NV58 838 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 TMEM161AQ9NX61 479 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 PCDHB7Q9Y5E2 793 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 NUMBLQ9Y6R0 609 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 PTPRBP23467 1997 aa9.37□□□□□ -0.91
SSBP3-212ENST00000528930 A0A0U1RQF3 1178 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 LAD1O00515 517 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 NCAM2O15394 837 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 LILRB3O75022 631 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 EPN2O95208 641 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 SRGAP2CP0DJJ0 459 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 ZSCAN20P17040 1043 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-212ENST00000528930 IBSPP21815 317 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-212ENST00000528930 CD72P21854 359 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 MUTP22033 750 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 PRPHP41219 470 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 PPP2R5DQ14738 602 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 ARID5BQ14865 1188 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 SLC44A4Q53GD3 710 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 KIAA1211LQ6NV74 962 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 SRGAP1Q7Z6B7 1085 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 ECHDC2Q86YB7 292 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 ERMNQ8TAM6 284 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 HNRNPLLQ8WVV9 542 aaKnown RBP9.36□□□□□ -0.91
SSBP3-212ENST00000528930 PSPC1Q8WXF1 523 aaKnown RBP9.36□□□□□ -0.91
SSBP3-212ENST00000528930 STAMQ92783 540 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 LOXL4Q96JB6 756 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 ZNF558Q96NG5 402 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 SCLT1Q96NL6 688 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 NACC1Q96RE7 527 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 TRAIPQ9BWF2 469 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 KLF16Q9BXK1 252 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-212ENST00000528930 ZBP1Q9H171 429 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 ARRDC1-AS1Q9H2J1 176 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 ZFAND3Q9H8U3 227 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 ATP6V0A4Q9HBG4 840 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 CHST12Q9NRB3 414 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 LRWD1Q9UFC0 647 aa9.36□□□□□ -0.91
SSBP3-212ENST00000528930 ABCA12Q86UK0 2595 aa9.35□□□□□ -0.91
SSBP3-212ENST00000528930 SHISA7A6NL88 538 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms