RNA–Protein interactions for RNA: ENST00000527495.5

CCDC90B-209, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-209ENST00000527495 PTPN7P35236 360 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 TRAPPC10P48553 1259 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 ATP8B2P98198 1209 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 OCA2Q04671 838 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 SP140Q13342 867 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 INAVAQ3KP66 663 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 OLFML1Q6UWY5 402 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 ZSCAN30Q86W11 494 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 DNAJC10Q8IXB1 793 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 RHOT2Q8IXI1 618 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 CBARPQ8N350 705 aaPredicted RBP4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 OTUD6BQ8N6M0 293 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 PAWRQ96IZ0 340 aaKnown RBP4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 ZSWIM1Q9BR11 485 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 LRRC27Q9C0I9 530 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 ZNF277Q9NRM2 450 aaPredicted RBP4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 RBM12Q9NTZ6 932 aaKnown RBP4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 LZTS1Q9Y250 596 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 SALL3Q9BXA9 1300 aa4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 COL11A2P13942 1736 aaPredicted RBP4.34□□□□□ -1.71
CCDC90B-209ENST00000527495 PHLDB1Q86UU1 1377 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 PIPSLA2A3N6 862 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 ZFPL1O95159 310 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 SEC24CP53992 1094 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 MALLQ13021 153 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 ANO4Q32M45 955 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 ATXN7L2Q5T6C5 722 aaPredicted RBP4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 PDZD4Q76G19 769 aaPredicted RBP4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 PQLC1Q8N2U9 271 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 OR56A1Q8NGH5 318 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 FATE1Q969F0 183 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 FUBP1Q96AE4 644 aaKnown RBP4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 AHCYL2Q96HN2 611 aaKnown RBP4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 BBC3Q96PG8 261 aaPredicted RBP4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 FAM193BQ96PV7 902 aaPredicted RBP4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 SLC2A13Q96QE2 648 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 MRI1Q9BV20 369 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 ACE2Q9BYF1 805 aaPredicted RBP4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 AS3MTQ9HBK9 375 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 FAM30AQ9NZY2 134 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 POGKQ9P215 609 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 ISY1Q9ULR0 285 aaKnown RBP4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 ACTL7AQ9Y615 435 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 FPGT-TNNI3KV9GXZ4 949 aa4.33□□□□□ -1.72
CCDC90B-209ENST00000527495 TSPAN6O43657 245 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 SNRPA1P09661 255 aaKnown RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 CT47B1P0C2W7 299 aaPredicted RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 DDX6P26196 483 aaKnown RBP eCLIP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 MGAT1P26572 445 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 ECHS1P30084 290 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 RAP2BP61225 183 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 EXOSC10Q01780 885 aaKnown RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 MGAT2Q10469 447 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 RESTQ13127 1097 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 NFE2Q16621 373 aaPredicted RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 INO80DQ53TQ3 878 aaPredicted RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 BRDTQ58F21 947 aaPredicted RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 MUM1L1Q5H9M0 696 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 OTUD7BQ6GQQ9 843 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 KSR2Q6VAB6 950 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 MED25Q71SY5 747 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 GPR149Q86SP6 731 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 C14orf80Q86SX3 495 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 SPATS2Q86XZ4 545 aaKnown RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 DCBLD1Q8N8Z6 715 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 TEX19Q8NA77 164 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 FAM98AQ8NCA5 519 aaKnown RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 MYRIPQ8NFW9 859 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 ZFP28Q8NHY6 868 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 SNRNP27Q8WVK2 155 aaKnown RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 RSPH1Q8WYR4 309 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 NACC2Q96BF6 587 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 CRAMP1Q96RY5 1269 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 MYCBPQ99417 103 aaPredicted RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 R3HDMLQ9H3Y0 253 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 VSX1Q9NZR4 365 aaPredicted RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 AJAP1Q9UKB5 411 aaPredicted RBP4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 PCDHGA2Q9Y5H1 932 aa4.32□□□□□ -1.72
CCDC90B-209ENST00000527495 AATKQ6ZMQ8 1374 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 PPFIA2O75334 1257 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 MYL3P08590 195 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 AGXTP21549 392 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 FBLP22087 321 aaKnown RBP4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 GCSHP23434 173 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 RRM1P23921 792 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 SLC6A4P31645 630 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 PLA2G5P39877 138 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 MPLP40238 635 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 PTH2RP49190 550 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 MMP14P50281 582 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 NEXNQ0ZGT2 675 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 MTM1Q13496 603 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 SIM2Q14190 667 aaPredicted RBP4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 NOMO1Q15155 1222 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 LONRF1Q17RB8 773 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 TMEM95Q3KNT9 176 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 CCDC93Q567U6 631 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 C1QTNF12Q5T7M4 302 aa4.31□□□□□ -1.72
CCDC90B-209ENST00000527495 SEM1Q6ZVN7 128 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms