RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 JADE1Q6IE81 842 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 CRELD2Q6UXH1 353 aaPredicted RBP11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 SV2BQ7L1I2 683 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 GET4Q7L5D6 327 aaPredicted RBP11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 SUGP1Q8IWZ8 645 aaKnown RBP11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 ZSWIM2Q8NEG5 633 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 ITFG1Q8TB96 612 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 STAMQ92783 540 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 KCNH6Q9H252 994 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 TBC1D7Q9P0N9 293 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 IGSF9Q9P2J2 1179 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 PCDHB8Q9UN66 801 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 NUB1Q9Y5A7 615 aa11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 TIMM13Q9Y5L4 95 aaPredicted RBP11.36□□□□□ -0.59
PRPF40B-204ENST00000527253 FRMD3A2A2Y4 597 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 M0QZQ0 153 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 NRG2O14511 850 aaPredicted RBP11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 SPTLC1O15269 473 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 VNN2O95498 520 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 NFICP08651 508 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 POU2F2P09086 479 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 CYP3A5P20815 502 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 AARSP49588 968 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 ACOT2P49753 483 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 WNT7BP56706 349 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 PPP2R3AQ06190 1150 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 HTR4Q13639 388 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 PKP1Q13835 747 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 STK38Q15208 465 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 E2F4Q16254 413 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 UVSSAQ2YD98 709 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 CTXN3Q4LDR2 81 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 SPATA1Q5VX52 437 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 PDILTQ8N807 584 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 TMEM105Q8N8V8 129 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 FAM212AQ96EL1 285 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 PHOX2BQ99453 314 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 RPF1Q9H9Y2 349 aaKnown RBP11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 UBQLN1Q9UMX0 589 aaKnown RBP11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 POLIQ9UNA4 740 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 DUSP12Q9UNI6 340 aa11.35□□□□□ -0.59
PRPF40B-204ENST00000527253 ARHGEF37A1IGU5 675 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 KRBA1A5PL33 1030 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 H7C4K7 107 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 SPTLC2O15270 562 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 PI15O43692 258 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 OAZ2O95190 189 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 ATF2P15336 505 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 STAT6P42226 847 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 KYAT1Q16773 422 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 SLC5A9Q2M3M2 681 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 CWF19L1Q69YN2 538 aaKnown RBP11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 SCARA3Q6AZY7 606 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 ADALQ6DHV7 355 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 SHC4Q6S5L8 630 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 PARM1Q6UWI2 310 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 FOXD4L3Q6VB84 417 aaPredicted RBP11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 CCDC73Q6ZRK6 1079 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 TCEAL8Q8IYN2 117 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 GLIS3Q8NEA6 775 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 FGF13Q92913 245 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 FGF14Q92915 247 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 MRPL44Q9H9J2 332 aaKnown RBP11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 AGO2Q9UKV8 859 aaKnown RBP11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 CDH7Q9ULB5 785 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 GTF3C3Q9Y5Q9 886 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 NUMBLQ9Y6R0 609 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 ANK1P16157 1881 aa11.34□□□□□ -0.59
PRPF40B-204ENST00000527253 MYH15Q9Y2K3 1946 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 PIRO00625 290 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 PPP6R2O75170 966 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 XYLBO75191 536 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 CFHP08603 1231 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 OR4Q2P0C623 313 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 IDEP14735 1019 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 GAP43P17677 238 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 TXLNAP40222 546 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 L1TD1Q5T7N2 865 aaKnown RBP11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 C9orf57Q5W0N0 161 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 SLFN12LQ6IEE8 588 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 RNF19BQ6ZMZ0 732 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 RTL10Q7L3V2 364 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 CD302Q8IX05 232 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 NPAS3Q8IXF0 933 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 EFCAB13Q8IY85 973 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 APPL2Q8NEU8 664 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 ING5Q8WYH8 240 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 HPS3Q969F9 1004 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 HVCN1Q96D96 273 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 FAM84AQ96KN4 292 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 TSPAN18Q96SJ8 248 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 CRISPLD1Q9H336 500 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 CYP4F11Q9HBI6 524 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 SEL1LQ9UBV2 794 aa11.33□□□□□ -0.6
PRPF40B-204ENST00000527253 SCN1AP35498 2009 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms