RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 LAG3P18627 525 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 LRPAP1P30533 357 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 CTNNB1P35222 781 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 PLXNA3P51805 1871 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 FANCCQ00597 558 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 PLCB2Q00722 1185 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 ENPEPQ07075 957 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 TRPC3Q13507 836 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 PTPN21Q16825 1174 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 VWA3BQ502W6 1294 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 KRT39Q6A163 491 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 KCNT2Q6UVM3 1135 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 C15orf39Q6ZRI6 1047 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 APTXQ7Z2E3 356 aaKnown RBP14.79□□□□□ -0.04
CD44-224ENST00000526669 TMEM173Q86WV6 379 aaPredicted RBP14.79□□□□□ -0.04
CD44-224ENST00000526669 TAS1R2Q8TE23 839 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 BCL7CQ8WUZ0 217 aaPredicted RBP14.79□□□□□ -0.04
CD44-224ENST00000526669 ZNF558Q96NG5 402 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 TSPAN18Q96SJ8 248 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 TMEM175Q9BSA9 504 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 C17orf80Q9BSJ5 609 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 CRACR2AQ9BSW2 395 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 PI4K2AQ9BTU6 479 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 NDST4Q9H3R1 872 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 CERS4Q9HA82 394 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 MARCH5Q9NX47 278 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 ITGA11Q9UKX5 1188 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 MTCL1Q9Y4B5 1905 aaKnown RBP14.79□□□□□ -0.04
CD44-224ENST00000526669 CHD9Q3L8U1 2897 aa14.79□□□□□ -0.04
CD44-224ENST00000526669 ANO9A1A5B4 782 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 I3L4J1 428 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 CSPG5O95196 566 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 SERPINC1P01008 464 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 ALDH2P05091 517 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 TPM2P07951 284 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 LINC00271P0C7V0 271 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 DNAJB2P25686 324 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 GTF2H1P32780 548 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 BRCC3P46736 316 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 AP3M2P53677 418 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 MCCD1P59942 119 aaPredicted RBP14.78□□□□□ -0.04
CD44-224ENST00000526669 MYL6P60660 151 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 NCOA4Q13772 614 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 RAB30Q15771 203 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 UPP1Q16831 310 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 SPOPLQ6IQ16 392 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 CXorf38Q8TB03 319 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 RSPH1Q8WYR4 309 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 SEMA4DQ92854 862 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 UROC1Q96N76 676 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 R3HCC1Q9Y3T6 440 aaKnown RBP14.78□□□□□ -0.04
CD44-224ENST00000526669 LAMA3Q16787 3333 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 PTPRDP23468 1912 aa14.78□□□□□ -0.04
CD44-224ENST00000526669 CHD7Q9P2D1 2997 aa14.77□□□□□ -0.04
CD44-224ENST00000526669 PIRO00625 290 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 TEX33O43247 280 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 N4BP1O75113 896 aaKnown RBP14.77□□□□□ -0.05
CD44-224ENST00000526669 B3GAT3O94766 335 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 RPL9P32969 192 aaKnown RBP14.77□□□□□ -0.05
CD44-224ENST00000526669 ALDH7A1P49419 539 aaKnown RBP14.77□□□□□ -0.05
CD44-224ENST00000526669 RBP5P82980 135 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 TAP1Q03518 808 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 LRMPQ12912 555 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 EPC2Q52LR7 807 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 PPP2R2DQ66LE6 453 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 CD300LGQ6UXG3 332 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 SCARA5Q6ZMJ2 495 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 SLC39A11Q8N1S5 342 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 FBXL13Q8NEE6 735 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 CLP1Q92989 425 aaKnown RBP14.77□□□□□ -0.05
CD44-224ENST00000526669 DDX27Q96GQ7 796 aaKnown RBP14.77□□□□□ -0.05
CD44-224ENST00000526669 ZNF560Q96MR9 790 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 COLEC11Q9BWP8 271 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 AAASQ9NRG9 546 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 POLIQ9UNA4 740 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 NUB1Q9Y5A7 615 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 PCDHB12Q9Y5F1 795 aa14.77□□□□□ -0.05
CD44-224ENST00000526669 LGALS16A8MUM7 142 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 SPTLC1O15269 473 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 TADA2AO75478 443 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 TAF6P49848 677 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 SMAD3P84022 425 aaKnown RBP14.76□□□□□ -0.05
CD44-224ENST00000526669 ZNF699Q32M78 642 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 DCLRE1AQ6PJP8 1040 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 KLHL23Q8NBE8 558 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 TIFAQ96CG3 184 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 IGSF21Q96ID5 467 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 HPDLQ96IR7 371 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 NAP1L5Q96NT1 182 aaPredicted RBP14.76□□□□□ -0.05
CD44-224ENST00000526669 TGS1Q96RS0 853 aaKnown RBP14.76□□□□□ -0.05
CD44-224ENST00000526669 RAB20Q9NX57 234 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 IFNKQ9P0W0 207 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 GCNT4Q9P109 453 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 ADAM28Q9UKQ2 775 aa14.76□□□□□ -0.05
CD44-224ENST00000526669 A0A1W2PPC1 479 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 SOX1O00570 391 aaPredicted RBP14.75□□□□□ -0.05
CD44-224ENST00000526669 AP5Z1O43299 807 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 SLC9A1P19634 815 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 BMPR1AP36894 532 aa14.75□□□□□ -0.05
CD44-224ENST00000526669 KLK7P49862 253 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms