RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 APPBP2Q92624 585 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 RPL36ALQ969Q0 106 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 MED15Q96RN5 788 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 QRSL1Q9H0R6 528 aaKnown RBP3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 GREM2Q9H772 168 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 ST3GAL5Q9UNP4 418 aa3.92□□□□□ -1.78
ECHDC1-219ENST00000526299 LINC01548A6NM66 108 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 LINC00473A8K010 186 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 ADM5C9JUS6 153 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 PROM1O43490 865 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 RGS19P49795 217 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 SOX10P56693 466 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 MRPS9P82933 396 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 FPGSQ05932 587 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 SLFN5Q08AF3 891 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 SLC10A2Q12908 348 aaPredicted RBP3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 TMEM119Q4V9L6 283 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 SEM1Q6ZVN7 128 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 CMIPQ8IY22 773 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 TOR1AIP2Q8NFQ8 470 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 SLC30A5Q8TAD4 765 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 CCHCR1Q8TD31 782 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 LPIN2Q92539 896 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 USP7Q93009 1102 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 TMEM125Q96AQ2 219 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 IFT122Q9HBG6 1241 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 DMRT3Q9NQL9 472 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 ZBTB21Q9ULJ3 1066 aa3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 RUVBL1Q9Y265 456 aaKnown RBP3.91□□□□□ -1.78
ECHDC1-219ENST00000526299 CDHR4A6H8M9 788 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 KIAA0391O15091 583 aaKnown RBP3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 NTN1O95631 604 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 CHRM2P08172 466 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 FCER1AP12319 257 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 ALAS1P13196 640 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 KELP23276 732 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 GATA3P23771 443 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 PCSK1P29120 753 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 ID4P47928 161 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 TUBA4AP68366 448 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 PPP3CAQ08209 521 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 TXNRD1Q16881 649 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 MUM1Q2TAK8 710 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 NBPF8Q3BBV2 869 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 RASAL3Q86YV0 1011 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 CLRN3Q8NCR9 226 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 SEMA6DQ8NFY4 1073 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 RGMAQ96B86 450 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 WACQ9BTA9 647 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 ADI1Q9BV57 179 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 ACE2Q9BYF1 805 aaPredicted RBP3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 SCOCQ9UIL1 159 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 BTBD3Q9Y2F9 522 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 CNTNAP2Q9UHC6 1331 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 CACNA1IQ9P0X4 2223 aa3.9□□□□□ -1.79
ECHDC1-219ENST00000526299 TEX33O43247 280 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 ULK1O75385 1050 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 MOSPD3O75425 235 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 SESN3P58005 492 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 DALRD3Q5D0E6 543 aaKnown RBP3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 TOR2AQ5JU69 321 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 GJC2Q5T442 439 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 RUSC1-AS1Q66K80 236 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 CASKIN2Q8WXE0 1202 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 HOXB13Q92826 284 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 MFSD3Q96ES6 412 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 HAPLN3Q96S86 360 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 BHMT2Q9H2M3 363 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 INTS13Q9NVM9 706 aa3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 VSX1Q9NZR4 365 aaPredicted RBP3.89□□□□□ -1.79
ECHDC1-219ENST00000526299 A0A1W2PS29 197 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 NEMP1O14524 444 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 ENDOD1O94919 500 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 CBSLP0DN79 551 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 MTHFD2P13995 350 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 BPIP17213 487 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 MPGP29372 298 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 CCKBRP32239 447 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 CBSP35520 551 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 CCT4P50991 539 aaKnown RBP3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 SCAND1P57086 179 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 CREMQ03060 361 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 SEPT2Q15019 361 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 PTPRRQ15256 657 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 FAM153CQ494X1 144 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 CD300EQ496F6 205 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 SLC9A4Q6AI14 798 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 ZNF517Q6ZMY9 492 aaPredicted RBP3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 TECPR1Q7Z6L1 1165 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 CYFIP2Q96F07 1278 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 PGBD1Q96JS3 809 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 ADGRE3Q9BY15 652 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 PIF1Q9H611 641 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 IFT22Q9H7X7 185 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 ZNF580Q9UK33 172 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 PADI4Q9UM07 663 aa3.88□□□□□ -1.79
ECHDC1-219ENST00000526299 PRAMEF33A0A0G2JMD5 474 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 PRAMEF10O60809 474 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 GPR32O75388 356 aa3.87□□□□□ -1.79
ECHDC1-219ENST00000526299 LATS1O95835 1130 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms