RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PIAS2O75928 621 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 THBDP07204 575 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 CYP2A6P11509 494 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 LAMP2P13473 410 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 ITIH2P19823 946 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 AMPD1P23109 780 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 TBXAS1P24557 533 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 HOXD10P28358 340 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 SLC7A1P30825 629 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 LTBRP36941 435 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 WASP42768 502 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 CCT4P50991 539 aaKnown RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 ZNF41P51814 821 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 TKTL1P51854 596 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 PPP5CP53041 499 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 POLE2P56282 527 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 NKX6-1P78426 367 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 GPLD1P80108 840 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 IRF9Q00978 393 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 DSC2Q02487 901 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 C17orf67Q0P5P2 114 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 DUSP4Q13115 394 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 CUL4BQ13620 913 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 OASLQ15646 514 aaKnown RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 CRY1Q16526 586 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 CCDC157Q569K6 752 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 ATPAF1Q5TC12 328 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 THEMIS2Q5TEJ8 643 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 ANGEL2Q5VTE6 544 aaKnown RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 TIGD7Q6NT04 549 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 ESRP1Q6NXG1 681 aaKnown RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 RUFY3Q7L099 469 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 PIWIL3Q7Z3Z3 882 aaKnown RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 THAP5Q7Z6K1 395 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 VSIG10LQ86VR7 867 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 CXorf67Q86X51 503 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 ARMC8Q8IUR7 673 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 ZFPM1Q8IX07 1006 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 FIBCD1Q8N539 461 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 ZBTB44Q8NCP5 570 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 MNS1Q8NEH6 495 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 UHMK1Q8TAS1 419 aaKnown RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 ETNPPLQ8TBG4 499 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 TBC1D22AQ8WUA7 517 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 KRT35Q92764 455 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 SDCCAG3Q96C92 435 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 RNF125Q96EQ8 232 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 NEIL1Q96FI4 390 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 RAX2Q96IS3 184 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 RUNDC3BQ96NL0 473 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 UIMC1Q96RL1 719 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 TNMDQ9H2S6 317 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 PCIF1Q9H4Z3 704 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 SUDS3Q9H7L9 328 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 SERHLQ9NQF3 203 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 DECR2Q9NUI1 292 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 GPATCH2Q9NW75 528 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.89□□□□□ -1.63
CD44-213ENST00000525209 UTP6Q9NYH9 597 aaKnown RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 CPNE7Q9UBL6 633 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 UBA2Q9UBT2 640 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 TMEFF2Q9UIK5 374 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 MSRAQ9UJ68 235 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 ZNF215Q9UL58 517 aaPredicted RBP4.89□□□□□ -1.63
CD44-213ENST00000525209 C2CD2Q9Y426 696 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 KIF3AQ9Y496 699 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 PCDHGC4Q9Y5F7 938 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 CSADQ9Y600 493 aa4.89□□□□□ -1.63
CD44-213ENST00000525209 WDR62O43379 1518 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 CCDC78A2IDD5 438 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 FAM47E-STBD1D6RA91 191 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 H3BNC9 293 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 SOX1O00570 391 aaPredicted RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 PSMA7O14818 248 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 ZBTB14O43829 449 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 PRPSAP2O60256 369 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 KERAO60938 352 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 COQ9O75208 318 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 PPFIA2O75334 1257 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 PALMO75781 387 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 MSL3P1P0C860 447 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 FAM157BP0CG42 384 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 MAPTP10636 758 aaKnown RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 KITP10721 976 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 GZMAP12544 262 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 TNNT1P13805 278 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 PTX3P26022 381 aaPredicted RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 ABCD3P28288 659 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 PBLDP30039 288 aaPredicted RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 ADSLP30566 484 aaPredicted RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 HOXA11P31270 313 aaPredicted RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 TCF7P36402 384 aaPredicted RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 ARL3P36405 182 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 THPOP40225 353 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 GPC3P51654 580 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 MANFP55145 182 aaKnown RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 SUMO3P55854 103 aaPredicted RBP4.88□□□□□ -1.63
CD44-213ENST00000525209 SLC26A5P58743 744 aa4.88□□□□□ -1.63
CD44-213ENST00000525209 ACTR2P61160 394 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms