RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 NAA30Q147X3 362 aaPredicted RBP4.3□□□□□ -1.72
NPM1-210ENST00000523339 ELF2Q15723 593 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 OCLNQ16625 522 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 CCDC178Q5BJE1 867 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 MARCH8Q5T0T0 291 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 ERICH6BQ5W0A0 696 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 FAM160B1Q5W0V3 765 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 CEP135Q66GS9 1140 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 TWF2Q6IBS0 349 aaKnown RBP4.3□□□□□ -1.72
NPM1-210ENST00000523339 GRASPQ7Z6J2 395 aaPredicted RBP4.3□□□□□ -1.72
NPM1-210ENST00000523339 ECHDC2Q86YB7 292 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 SAMD3Q8N6K7 520 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 CMASQ8NFW8 434 aaPredicted RBP4.3□□□□□ -1.72
NPM1-210ENST00000523339 OR13H1Q8NG92 308 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 FEZF2Q8TBJ5 459 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 UBASH3BQ8TF42 649 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 FOXD4L4Q8WXT5 416 aaPredicted RBP4.3□□□□□ -1.72
NPM1-210ENST00000523339 PIBF1Q8WXW3 757 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 FAM3CQ92520 227 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 CLDN23Q96B33 292 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 SEC62Q99442 399 aaKnown RBP4.3□□□□□ -1.72
NPM1-210ENST00000523339 SENP7Q9BQF6 1050 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 SDF4Q9BRK5 362 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 RPP25Q9BUL9 199 aaKnown RBP4.3□□□□□ -1.72
NPM1-210ENST00000523339 LRRCC1Q9C099 1032 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 PLEKHA4Q9H4M7 779 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 RNF41Q9H4P4 317 aaPredicted RBP4.3□□□□□ -1.72
NPM1-210ENST00000523339 DCTPP1Q9H773 170 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 RXFP3Q9NSD7 469 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 ZDHHC7Q9NXF8 308 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 FAN1Q9Y2M0 1017 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.3□□□□□ -1.72
NPM1-210ENST00000523339 NEUROG3Q9Y4Z2 214 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 BPTFQ12830 3046 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 BAZ2AQ9UIF9 1905 aaKnown RBP4.3□□□□□ -1.72
NPM1-210ENST00000523339 LAMA4Q16363 1823 aa4.3□□□□□ -1.72
NPM1-210ENST00000523339 NBEAQ8NFP9 2946 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 KDM3AQ9Y4C1 1321 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 ITPR1Q14643 2758 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 CAPN9O14815 690 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 ZBTB5O15062 677 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 TEX28O15482 410 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 PRMT3O60678 531 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 VTNP04004 478 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 GALTP07902 379 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 EPHA1P21709 976 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 GBP1P32455 592 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 OR1G1P47890 313 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 GLUD2P49448 558 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 IRAK1P51617 712 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 KPNA1P52294 538 aaPredicted RBP4.29□□□□□ -1.72
NPM1-210ENST00000523339 ATXN3P54252 364 aaPredicted RBP4.29□□□□□ -1.72
NPM1-210ENST00000523339 HAND2P61296 217 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 SIM1P81133 766 aaPredicted RBP4.29□□□□□ -1.72
NPM1-210ENST00000523339 SATB1Q01826 763 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 CREMQ03060 361 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 TROAPQ12815 778 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 NOMO2Q5JPE7 1267 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 CLLU1OSQ5K130 101 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 PPM1LQ5SGD2 360 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 TSHZ3Q63HK5 1081 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 TCEAL6Q6IPX3 200 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 FAM228AQ86W67 206 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 TMEM173Q86WV6 379 aaPredicted RBP4.29□□□□□ -1.72
NPM1-210ENST00000523339 PROSER1Q86XN7 944 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 LURAP1LQ8IV03 231 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 YAF2Q8IY57 180 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 CEP120Q8N960 986 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 DEFB124Q8NES8 71 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 CSGALNACT1Q8TDX6 532 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 TMEM40Q8WWA1 233 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 ING5Q8WYH8 240 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 RSPH1Q8WYR4 309 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 NELL1Q92832 810 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 GATA6Q92908 595 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 FGF13Q92913 245 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 MAP4K1Q92918 833 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 TCEAL3Q969E4 200 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 PGBD4Q96DM1 585 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 LOXL4Q96JB6 756 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 INPP4AQ96PE3 977 aaPredicted RBP4.29□□□□□ -1.72
NPM1-210ENST00000523339 RPS6KC1Q96S38 1066 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 UBAC1Q9BSL1 405 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 DDX23Q9BUQ8 820 aaKnown RBP4.29□□□□□ -1.72
NPM1-210ENST00000523339 APOL6Q9BWW8 343 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 NT5C3AQ9H0P0 336 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 CHRDQ9H2X0 955 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 CCDC86Q9H6F5 360 aaKnown RBP4.29□□□□□ -1.72
NPM1-210ENST00000523339 JMJD4Q9H9V9 463 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 TMEM9BQ9NQ34 198 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 CNTN3Q9P232 1028 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 SLC9A2Q9UBY0 812 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 KLK13Q9UKR3 277 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 PRG3Q9Y2Y8 225 aaPredicted RBP4.29□□□□□ -1.72
NPM1-210ENST00000523339 MSRB2Q9Y3D2 182 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 MRPS23Q9Y3D9 190 aaKnown RBP4.29□□□□□ -1.72
NPM1-210ENST00000523339 TELO2Q9Y4R8 837 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 PCDHGA5Q9Y5G8 931 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 PIAS3Q9Y6X2 628 aa4.29□□□□□ -1.72
NPM1-210ENST00000523339 MYH4Q9Y623 1939 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms