RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ABLIM1O14639 778 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 MEFVO15553 781 aaPredicted RBP24.9■■□□□ 1.58
PVT1-218ENST00000523328 GDI1P31150 447 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 NPTX2P47972 431 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 NRLP54845 237 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 CTXN3Q4LDR2 81 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 CYP4A22Q5TCH4 519 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 FAM3CQ92520 227 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 C18orf25Q96B23 403 aaPredicted RBP24.9■■□□□ 1.58
PVT1-218ENST00000523328 RTKNQ9BST9 563 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 TARS2Q9BW92 718 aaKnown RBP24.9■■□□□ 1.58
PVT1-218ENST00000523328 TMEM134Q9H6X4 195 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 CNTN3Q9P232 1028 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 PIAS3Q9Y6X2 628 aa24.9■■□□□ 1.58
PVT1-218ENST00000523328 CCDC169A6NNP5 214 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 PROZP22891 400 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 RPL9P32969 192 aaKnown RBP24.89■■□□□ 1.58
PVT1-218ENST00000523328 EPHA5P54756 1037 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 PEX3P56589 373 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 SAFBQ15424 915 aaKnown RBP eCLIP24.89■■□□□ 1.58
PVT1-218ENST00000523328 DAW1Q8N136 415 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 DEPDC1BQ8WUY9 529 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 SUSD3Q96L08 255 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 ACAP3Q96P50 834 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 MRPL4Q9BYD3 311 aaKnown RBP24.89■■□□□ 1.58
PVT1-218ENST00000523328 LMAN1LQ9HAT1 526 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 ARHGAP28Q9P2N2 729 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 AFF4Q9UHB7 1163 aaKnown RBP24.89■■□□□ 1.58
PVT1-218ENST00000523328 KIAA1024Q9UPX6 916 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 NUB1Q9Y5A7 615 aa24.89■■□□□ 1.58
PVT1-218ENST00000523328 RALGAPA1Q6GYQ0 2036 aa24.88■■□□□ 1.57
PVT1-218ENST00000523328 DCDC2BA2VCK2 349 aa24.88■■□□□ 1.57
PVT1-218ENST00000523328 MCF2P10911 925 aa24.88■■□□□ 1.57
PVT1-218ENST00000523328 VIPR2P41587 438 aa24.88■■□□□ 1.57
PVT1-218ENST00000523328 FXR2P51116 673 aaKnown RBP eCLIP24.88■■□□□ 1.57
PVT1-218ENST00000523328 TWF1Q12792 350 aa24.88■■□□□ 1.57
PVT1-218ENST00000523328 LPAL2Q16609 132 aa24.88■■□□□ 1.57
PVT1-218ENST00000523328 IQCEQ6IPM2 695 aa24.88■■□□□ 1.57
PVT1-218ENST00000523328 ELMOD1Q8N336 334 aa24.88■■□□□ 1.57
PVT1-218ENST00000523328 CELF5Q8N6W0 485 aaKnown RBP24.88■■□□□ 1.57
PVT1-218ENST00000523328 C4orf32Q8N8J7 132 aa24.88■■□□□ 1.57
PVT1-218ENST00000523328 ZNF512Q96ME7 567 aaPredicted RBP24.88■■□□□ 1.57
PVT1-218ENST00000523328 TRPV4Q9HBA0 871 aa24.88■■□□□ 1.57
PVT1-218ENST00000523328 DDX19AQ9NUU7 478 aaKnown RBP24.88■■□□□ 1.57
PVT1-218ENST00000523328 ARNTLO00327 626 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 KRT37O76014 449 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 CHRNB1P11230 501 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 GJA1P17302 382 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 CCR3P51677 355 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 SPEM2Q0P670 501 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 PPP2R5DQ14738 602 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 TTC38Q5R3I4 469 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 LAIR1Q6GTX8 287 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 ZNF280DQ6N043 979 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 FOXP1Q9H334 677 aaPredicted RBP24.87■■□□□ 1.57
PVT1-218ENST00000523328 LRWD1Q9UFC0 647 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 MAFFQ9ULX9 164 aa24.87■■□□□ 1.57
PVT1-218ENST00000523328 MYL4P12829 197 aa24.86■■□□□ 1.57
PVT1-218ENST00000523328 SATB1Q01826 763 aa24.86■■□□□ 1.57
PVT1-218ENST00000523328 GAS6Q14393 721 aa24.86■■□□□ 1.57
PVT1-218ENST00000523328 MPZL3Q6UWV2 235 aa24.86■■□□□ 1.57
PVT1-218ENST00000523328 MFSD6LQ8IWD5 586 aa24.86■■□□□ 1.57
PVT1-218ENST00000523328 LEMD2Q8NC56 503 aa24.86■■□□□ 1.57
PVT1-218ENST00000523328 ZSCAN18Q8TBC5 510 aaPredicted RBP24.86■■□□□ 1.57
PVT1-218ENST00000523328 DDX12PQ92771 950 aa24.86■■□□□ 1.57
PVT1-218ENST00000523328 TBC1D32Q96NH3 1257 aa24.86■■□□□ 1.57
PVT1-218ENST00000523328 RAB23Q9ULC3 237 aa24.86■■□□□ 1.57
PVT1-218ENST00000523328 ZNF263O14978 683 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 HIP1RO75146 1068 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 CCNE1P24864 410 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 MCM4P33991 863 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 NEK4P51957 841 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 MAPK7Q13164 816 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 DMP1Q13316 513 aaPredicted RBP24.85■■□□□ 1.57
PVT1-218ENST00000523328 TEAD2Q15562 447 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 RNF19BQ6ZMZ0 732 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 APPL2Q8NEU8 664 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 BEST2Q8NFU1 509 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 ZBTB45Q96K62 511 aaPredicted RBP24.85■■□□□ 1.57
PVT1-218ENST00000523328 TCHPQ9BT92 498 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 KMT5AQ9NQR1 393 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 ASAH2Q9NR71 780 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.85■■□□□ 1.57
PVT1-218ENST00000523328 MYH11P35749 1972 aa24.85■■□□□ 1.57
PVT1-218ENST00000523328 MAP1BP46821 2468 aaKnown RBP24.84■■□□□ 1.57
PVT1-218ENST00000523328 HEPACAM2A8MVW5 462 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 E9PMD0 336 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 MLLT6P55198 1093 aaPredicted RBP24.84■■□□□ 1.57
PVT1-218ENST00000523328 PDIA5Q14554 519 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 SLC10A6Q3KNW5 377 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 IGSF22Q8N9C0 903 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 SHKBP1Q8TBC3 707 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 SNX29Q8TEQ0 813 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 RSPRY1Q96DX4 576 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 C8orf76Q96K31 380 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 RUSC1Q9BVN2 902 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 LRRC3Q9BY71 257 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 PCDHB8Q9UN66 801 aa24.84■■□□□ 1.57
PVT1-218ENST00000523328 RBM19Q9Y4C8 960 aaKnown RBP24.84■■□□□ 1.57
PVT1-218ENST00000523328 VNN2O95498 520 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms