RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 KRTAP3-1Q9BYR8 98 aa4.62□□□□□ -1.67
VPS13B-208ENST00000521037 FTOQ9C0B1 505 aaKnown RBP eCLIP4.62□□□□□ -1.67
VPS13B-208ENST00000521037 PRDM14Q9GZV8 571 aa4.62□□□□□ -1.67
VPS13B-208ENST00000521037 VCPKMTQ9H867 229 aa4.62□□□□□ -1.67
VPS13B-208ENST00000521037 COPRSQ9NQ92 184 aa4.62□□□□□ -1.67
VPS13B-208ENST00000521037 SERPINB13Q9UIV8 391 aa4.62□□□□□ -1.67
VPS13B-208ENST00000521037 PLA2G2DQ9UNK4 145 aa4.62□□□□□ -1.67
VPS13B-208ENST00000521037 GPR55Q9Y2T6 319 aaPredicted RBP4.62□□□□□ -1.67
VPS13B-208ENST00000521037 PRKAB1Q9Y478 270 aa4.62□□□□□ -1.67
VPS13B-208ENST00000521037 MICAL3Q7RTP6 2002 aa4.62□□□□□ -1.67
VPS13B-208ENST00000521037 MYO5AQ9Y4I1 1855 aaKnown RBP4.61□□□□□ -1.67
VPS13B-208ENST00000521037 SH3D21A4FU49 640 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 SRRM3A6NNA2 597 aaPredicted RBP4.61□□□□□ -1.67
VPS13B-208ENST00000521037 C2CD4DB7Z1M9 353 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 KLF4O43474 513 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 ASGR2P07307 311 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 SUPT20HL2P0C7V6 817 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 GBP1P32455 592 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 BMPR1AP36894 532 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 CTSKP43235 329 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 KCNJ6P48051 423 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 LIMS1P48059 325 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 NASPP49321 788 aaPredicted RBP4.61□□□□□ -1.67
VPS13B-208ENST00000521037 CYP4F8P98187 520 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 RAB33AQ14088 237 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 CCDC6Q16204 474 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 PLEKHN1Q494U1 663 aaPredicted RBP4.61□□□□□ -1.67
VPS13B-208ENST00000521037 CERKLQ49MI3 558 aaPredicted RBP4.61□□□□□ -1.67
VPS13B-208ENST00000521037 ZNF618Q5T7W0 954 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 CCDC181Q5TID7 509 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 LIPIQ6XZB0 460 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 TMEM184AQ6ZMB5 413 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 EP400NLQ6ZTU2 488 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 LRRC8DQ7L1W4 858 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 UBALD2Q8IYN6 164 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 ADGRG2Q8IZP9 1017 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 DBF4BQ8NFT6 615 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 AFAP1L1Q8TED9 768 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 FNIP1Q8TF40 1166 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 ZNF689Q96CS4 500 aaPredicted RBP4.61□□□□□ -1.67
VPS13B-208ENST00000521037 RTKNQ9BST9 563 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 STK31Q9BXU1 1019 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS13B-208ENST00000521037 LMAN2LQ9H0V9 348 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 ADAMTS1Q9UHI8 967 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 SORCS3Q9UPU3 1222 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 PA2G4Q9UQ80 394 aaKnown RBP4.61□□□□□ -1.67
VPS13B-208ENST00000521037 COL4A3BPQ9Y5P4 624 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 DUSP10Q9Y6W6 482 aa4.61□□□□□ -1.67
VPS13B-208ENST00000521037 GREB1LQ9C091 1923 aaPredicted RBP4.61□□□□□ -1.67
VPS13B-208ENST00000521037 HECTD1Q9ULT8 2610 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 A0A1B0GTL3 188 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 NUDT19A8MXV4 375 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 K7ESM1 405 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 SLC30A4O14863 429 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 WDR46O15213 610 aaKnown RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 ZNF205O95201 554 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 ATE1O95260 518 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 BPNT1O95861 308 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 ITGB1P05556 798 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 AKR1B1P15121 316 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 ATF2P15336 505 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 ARL4AP40617 200 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 MAPKAPK2P49137 400 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 RNF4P78317 190 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 MVKQ03426 396 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 TMEM62Q0P6H9 643 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 DUSP28Q4G0W2 176 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 N4BP2L1Q5TBK1 243 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 CDCP2Q5VXM1 449 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 SPTY2D1Q68D10 685 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 ANKS3Q6ZW76 656 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 REC114Q7Z4M0 266 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 FERMT3Q86UX7 667 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 FBXO16Q8IX29 292 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 SPATA5Q8NB90 893 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 FBXO27Q8NI29 283 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 COPS5Q92905 334 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 TMEM74Q96NL1 305 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 JMJD8Q96S16 334 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 SRPK1Q96SB4 655 aaKnown RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 NUP88Q99567 741 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 HAUS7Q99871 368 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 RIOK1Q9BRS2 568 aaKnown RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 NT5C1AQ9BXI3 368 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 TRIM55Q9BYV6 548 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 SPC25Q9HBM1 224 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 ERVK-5Q9HDB9 667 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 A1CFQ9NQ94 594 aaKnown RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 PIH1D3Q9NQM4 214 aaKnown RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 SNTG2Q9NY99 539 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 C9orf78Q9NZ63 289 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 TAF6LQ9Y6J9 622 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 ANKRD17O75179 2603 aaKnown RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 DNHD1Q96M86 4753 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 NAV1Q8NEY1 1877 aa4.6□□□□□ -1.67
VPS13B-208ENST00000521037 TRIP12Q14669 1992 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-208ENST00000521037 C1QTNF3-AMACRE9PGA6 284 aa4.59□□□□□ -1.67
VPS13B-208ENST00000521037 HAS3O00219 553 aa4.59□□□□□ -1.67
VPS13B-208ENST00000521037 MATN3O15232 486 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms