RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 OR8K1Q8NGG5 319 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 PPP1R13BQ96KQ4 1090 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 ACP6Q9NPH0 428 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 POLIQ9UNA4 740 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 INPP5FQ9Y2H2 1132 aa16.2■□□□□ 0.18
SREK1-209ENST00000520953 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.19■□□□□ 0.18
SREK1-209ENST00000520953 ASS1P00966 412 aaKnown RBP16.19■□□□□ 0.18
SREK1-209ENST00000520953 POMCP01189 267 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 TPM1P09493 284 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 KCNE1P15382 129 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 CSF2RAP15509 400 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 TSC1Q92574 1164 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 SEPT8Q92599 483 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 NT5C1BQ96P26 610 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 PANX2Q96RD6 677 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 AGAP1Q9UPQ3 857 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 F8VZ95 297 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 FOXN3O00409 490 aaPredicted RBP16.19■□□□□ 0.18
SREK1-209ENST00000520953 B4GALT3O60512 393 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 AP3M2P53677 418 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 TRPC3Q13507 836 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 NAB2Q15742 525 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 CLLU1OSQ5K130 101 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 SCARA5Q6ZMJ2 495 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 SLC24A5Q71RS6 500 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 PPP1R10Q96QC0 940 aaKnown RBP16.19■□□□□ 0.18
SREK1-209ENST00000520953 BAG1Q99933 345 aaPredicted RBP16.19■□□□□ 0.18
SREK1-209ENST00000520953 RSAD1Q9HA92 442 aa16.19■□□□□ 0.18
SREK1-209ENST00000520953 FAM170AA1A519 330 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 KIAA0355O15063 1070 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 GFPT2O94808 682 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 TIMP1P01033 207 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 ACRP10323 421 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 RAB27AP51159 221 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 RAD9BQ6WBX8 426 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.18■□□□□ 0.18
SREK1-209ENST00000520953 TMCO2Q7Z6W1 182 aaPredicted RBP16.18■□□□□ 0.18
SREK1-209ENST00000520953 CD302Q8IX05 232 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 ZNF592Q92610 1267 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 SPAG5Q96R06 1193 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 PAAF1Q9BRP4 392 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 PAXBP1Q9Y5B6 917 aa16.18■□□□□ 0.18
SREK1-209ENST00000520953 RAP1GAPP47736 663 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 FAM189BP81408 668 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 RBM10P98175 930 aaKnown RBP16.17■□□□□ 0.18
SREK1-209ENST00000520953 ZNF699Q32M78 642 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 HGSNATQ68CP4 663 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 STK33Q9BYT3 514 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 C1orf112Q9NSG2 853 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 ARHGAP20Q9P2F6 1191 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 NXF1Q9UBU9 619 aaKnown RBP16.17■□□□□ 0.18
SREK1-209ENST00000520953 FBXL5Q9UKA1 691 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 RAG1P15918 1043 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 WDR44Q5JSH3 913 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 IRF2BP2Q7Z5L9 587 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 ZNF397Q8NF99 534 aaPredicted RBP16.17■□□□□ 0.18
SREK1-209ENST00000520953 FTHL17Q9BXU8 183 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 EDEM3Q9BZQ6 932 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 SDCBP2Q9H190 292 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 HCSTQ9UBK5 93 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 GIT1Q9Y2X7 761 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 DERAQ9Y315 318 aa16.17■□□□□ 0.18
SREK1-209ENST00000520953 MICAL3Q7RTP6 2002 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 SPTLC1O15269 473 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 WEE2P0C1S8 567 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 FECHP22830 423 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 ASPAP45381 313 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 CDH8P55286 799 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 MEA1Q16626 185 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 SFMBT2Q5VUG0 894 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 C9orf57Q5W0N0 161 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 HPDLQ96IR7 371 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 RPS6KC1Q96S38 1066 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 SMYD3Q9H7B4 428 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 ITGA11Q9UKX5 1188 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 UBQLN1Q9UMX0 589 aaKnown RBP16.16■□□□□ 0.18
SREK1-209ENST00000520953 TTC3P53804 2025 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 CASTOR2A6NHX0 329 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 F8W810 466 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 USP8P40818 1118 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 CUL2Q13617 745 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 SGSM1Q2NKQ1 1148 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 WDR72Q3MJ13 1102 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 TOGARAM2Q6ZUX3 1019 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 NT5DC4Q86YG4 428 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 HACE1Q8IYU2 909 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 C7orf61Q8IZ16 206 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 BEST2Q8NFU1 509 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 DESI2Q9BSY9 194 aa16.16■□□□□ 0.18
SREK1-209ENST00000520953 ARHGAP6O43182 974 aa16.15■□□□□ 0.18
SREK1-209ENST00000520953 EVI5O60447 810 aa16.15■□□□□ 0.18
SREK1-209ENST00000520953 ZC3H11AO75152 810 aaKnown RBP eCLIP16.15■□□□□ 0.18
SREK1-209ENST00000520953 SYN1P17600 705 aa16.15■□□□□ 0.18
SREK1-209ENST00000520953 CD58P19256 250 aa16.15■□□□□ 0.18
SREK1-209ENST00000520953 ACO1P21399 889 aaKnown RBP16.15■□□□□ 0.18
SREK1-209ENST00000520953 HNRNPH3P31942 346 aaKnown RBP16.15■□□□□ 0.18
SREK1-209ENST00000520953 SOX5P35711 763 aa16.15■□□□□ 0.18
SREK1-209ENST00000520953 RBP5P82980 135 aa16.15■□□□□ 0.18
SREK1-209ENST00000520953 C3orf58Q8NDZ4 430 aa16.15■□□□□ 0.18
SREK1-209ENST00000520953 SHC3Q92529 594 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms