RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 SLC35G2Q8TBE7 412 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 RPS6KC1Q96S38 1066 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 SARGQ9BW04 601 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 SERHL2Q9H4I8 314 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 ANKFY1Q9P2R3 1169 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 SCOCQ9UIL1 159 aa5.16□□□□□ -1.58
SQLE-204ENST00000520493 ANO9A1A5B4 782 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 DRGXA6NNA5 263 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 LPXNO60711 386 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 OSMP13725 252 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 GSPT1P15170 499 aaKnown RBP5.15□□□□□ -1.59
SQLE-204ENST00000520493 MCAMP43121 646 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 ACAP2Q15057 778 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 ATP2B3Q16720 1220 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 LONRF3Q496Y0 759 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 FAM102AQ5T9C2 384 aaPredicted RBP5.15□□□□□ -1.59
SQLE-204ENST00000520493 AFMIDQ63HM1 303 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 PCSK4Q6UW60 755 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 B3GNT9Q6UX72 402 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 CHST15Q7LFX5 561 aaPredicted RBP5.15□□□□□ -1.59
SQLE-204ENST00000520493 RHOT2Q8IXI1 618 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.15□□□□□ -1.59
SQLE-204ENST00000520493 FBXO18Q8NFZ0 1043 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 SLC35B2Q8TB61 432 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 CASKIN2Q8WXE0 1202 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 RUNDC1Q96C34 613 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 CYFIP2Q96F07 1278 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 SLC39A13Q96H72 371 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 MRI1Q9BV20 369 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 SLC12A5Q9H2X9 1139 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 TOR3AQ9H497 397 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 MANSC1Q9H8J5 431 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 DMRT3Q9NQL9 472 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 MAN1C1Q9NR34 630 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 RNF181Q9P0P0 153 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 DNM3Q9UQ16 869 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 COMMD10Q9Y6G5 202 aa5.15□□□□□ -1.59
SQLE-204ENST00000520493 GRID2IPA4D2P6 1211 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 ZNF185O15231 689 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 OFD1O75665 1012 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 POMCP01189 267 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 POU2F2P09086 479 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 ALAS1P13196 640 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 BMP5P22003 454 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 ZFP36P26651 326 aaKnown RBP5.14□□□□□ -1.59
SQLE-204ENST00000520493 ZEB1P37275 1124 aaPredicted RBP5.14□□□□□ -1.59
SQLE-204ENST00000520493 PTTG1IPP53801 180 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 MGAT2Q10469 447 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 AGAP9Q5VTM2 703 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 SLC4A10Q6U841 1118 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 MED25Q71SY5 747 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 SRGAP1Q7Z6B7 1085 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 OR56A1Q8NGH5 318 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 CAVIN3Q969G5 261 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 WDR11Q9BZH6 1224 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 RNPEPQ9H4A4 650 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 SAP30BPQ9UHR5 308 aaKnown RBP5.14□□□□□ -1.59
SQLE-204ENST00000520493 AJAP1Q9UKB5 411 aaPredicted RBP5.14□□□□□ -1.59
SQLE-204ENST00000520493 NOX1Q9Y5S8 564 aa5.14□□□□□ -1.59
SQLE-204ENST00000520493 NDUFS2O75306 463 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 GPR32O75388 356 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 CDKL5O76039 1030 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 FOSP01100 380 aaPredicted RBP5.13□□□□□ -1.59
SQLE-204ENST00000520493 HRGP04196 525 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 HKR1P10072 659 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 GUCY1A2P33402 732 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 WASP42768 502 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 SLC16A1P53985 500 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 PPP3CAQ08209 521 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 RESTQ13127 1097 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 BRD3Q15059 726 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 CCDC142Q17RM4 750 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 ERCC6LQ2NKX8 1250 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 ARHGAP29Q52LW3 1261 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 IFIT1BQ5T764 474 aaKnown RBP5.13□□□□□ -1.59
SQLE-204ENST00000520493 ABHD17BQ5VST6 288 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 CYB5RLQ6IPT4 315 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 PPP4R4Q6NUP7 873 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 Q6YL49 198 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 PJA1Q8NG27 643 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 HOXB13Q92826 284 aaPredicted RBP5.13□□□□□ -1.59
SQLE-204ENST00000520493 HPS3Q969F9 1004 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 COQ10AQ96MF6 247 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 C7orf25Q9BPX7 421 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 TEX101Q9BY14 249 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 ANLNQ9NQW6 1124 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 DDX21Q9NR30 783 aaKnown RBP eCLIP5.13□□□□□ -1.59
SQLE-204ENST00000520493 ATRNL1Q5VV63 1379 aa5.13□□□□□ -1.59
SQLE-204ENST00000520493 UNC119BA6NIH7 251 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 CTNND1O60716 968 aaKnown RBP5.12□□□□□ -1.59
SQLE-204ENST00000520493 NUDT3O95989 172 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 LMNAP02545 664 aaKnown RBP5.12□□□□□ -1.59
SQLE-204ENST00000520493 CFIP05156 583 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 C5AR1P21730 350 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 ALDH1A3P47895 512 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 KRTAP10-11P60412 298 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 CREMQ03060 361 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 TSHZ3Q63HK5 1081 aa5.12□□□□□ -1.59
SQLE-204ENST00000520493 OTUD7BQ6GQQ9 843 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms