RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 CASQ1P31415 396 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 PDE6CP51160 858 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 YARSP54577 528 aaKnown RBP17.21■□□□□ 0.35
SNHG6-201ENST00000520348 BPIFB4P59827 614 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 DSC3Q14574 896 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 ZNF569Q5MCW4 686 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 TRAF7Q6Q0C0 670 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 SLC47A2Q86VL8 602 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 PALB2Q86YC2 1186 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 SECISBP2LQ93073 1101 aaKnown RBP17.21■□□□□ 0.35
SNHG6-201ENST00000520348 ELMO3Q96BJ8 720 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 ZMAT2Q96NC0 199 aaKnown RBP17.21■□□□□ 0.35
SNHG6-201ENST00000520348 PACSIN1Q9BY11 444 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.21■□□□□ 0.35
SNHG6-201ENST00000520348 SALL4Q9UJQ4 1053 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 ST3GAL5Q9UNP4 418 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 R3HCC1Q9Y3T6 440 aaKnown RBP17.21■□□□□ 0.35
SNHG6-201ENST00000520348 PCDHB2Q9Y5E7 798 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 DUSP10Q9Y6W6 482 aa17.21■□□□□ 0.35
SNHG6-201ENST00000520348 ANO9A1A5B4 782 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 DNM1LO00429 736 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 GPR182O15218 404 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 ITGB3P05106 788 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 H2AFZP0C0S5 128 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 TMEM253P0C7T8 217 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 TNFAIP3P21580 790 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 CDK7P50613 346 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 H2AFVQ71UI9 128 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 RPUSD2Q8IZ73 545 aaKnown RBP17.2■□□□□ 0.34
SNHG6-201ENST00000520348 USP38Q8NB14 1042 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 TRIM58Q8NG06 486 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 SH3TC2Q8TF17 1288 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 U2AF1L4Q8WU68 220 aaKnown RBP17.2■□□□□ 0.34
SNHG6-201ENST00000520348 ZNF592Q92610 1267 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 PCDHB18PQ96TA0 734 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 BEGAINQ9BUH8 593 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 UNC93B1Q9H1C4 597 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 TRMT13Q9NUP7 481 aaKnown RBP17.2■□□□□ 0.34
SNHG6-201ENST00000520348 TSKSQ9UJT2 592 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 IPPQ9Y573 584 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 PCDHGC5Q9Y5F6 944 aa17.2■□□□□ 0.34
SNHG6-201ENST00000520348 ARVCFO00192 962 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 CTSHP09668 335 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 CYP3A5P20815 502 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 GTF2F1P35269 517 aaKnown RBP eCLIP17.19■□□□□ 0.34
SNHG6-201ENST00000520348 THPOP40225 353 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 RBP5P82980 135 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 AMPD2Q01433 879 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 MRPL10Q7Z7H8 261 aaKnown RBP17.19■□□□□ 0.34
SNHG6-201ENST00000520348 LRRC52Q8N7C0 313 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 RBBP8NLQ8NC74 664 aaPredicted RBP17.19■□□□□ 0.34
SNHG6-201ENST00000520348 KIF12Q96FN5 646 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 NAPGQ99747 312 aaPredicted RBP17.19■□□□□ 0.34
SNHG6-201ENST00000520348 TRIM6Q9C030 488 aaPredicted RBP17.19■□□□□ 0.34
SNHG6-201ENST00000520348 CXCL16Q9H2A7 254 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 AGO3Q9H9G7 860 aaKnown RBP17.19■□□□□ 0.34
SNHG6-201ENST00000520348 CYP3A43Q9HB55 503 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 STARD7Q9NQZ5 370 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 DPP3Q9NY33 737 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 OGDHLQ9ULD0 1010 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 UBQLN1Q9UMX0 589 aaKnown RBP17.19■□□□□ 0.34
SNHG6-201ENST00000520348 HES2Q9Y543 173 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 CAPN6Q9Y6Q1 641 aa17.19■□□□□ 0.34
SNHG6-201ENST00000520348 ANKRD62A6NC57 917 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 KBTBD13C9JR72 458 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 RIOK3O14730 519 aaKnown RBP17.18■□□□□ 0.34
SNHG6-201ENST00000520348 ZNF623O75123 536 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 TACC1O75410 805 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
SNHG6-201ENST00000520348 KRT5P13647 590 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 POLR2BP30876 1174 aaKnown RBP17.18■□□□□ 0.34
SNHG6-201ENST00000520348 USP8P40818 1118 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 GALCP54803 685 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 HADHBP55084 474 aaKnown RBP17.18■□□□□ 0.34
SNHG6-201ENST00000520348 YWHAEP62258 255 aaKnown RBP17.18■□□□□ 0.34
SNHG6-201ENST00000520348 TUBB2AQ13885 445 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 LPIN1Q14693 890 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 ZNF667Q5HYK9 610 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 FAM43BQ6ZT52 329 aaPredicted RBP17.18■□□□□ 0.34
SNHG6-201ENST00000520348 MYRIPQ8NFW9 859 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 NOX5Q96PH1 765 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 TUBB2BQ9BVA1 445 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 ACP6Q9NPH0 428 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 CISHQ9NSE2 258 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 PCDHB4Q9Y5E5 795 aa17.18■□□□□ 0.34
SNHG6-201ENST00000520348 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.18■□□□□ 0.34
SNHG6-201ENST00000520348 HTTP42858 3142 aa17.17■□□□□ 0.34
SNHG6-201ENST00000520348 MACROD2A1Z1Q3 448 aa17.17■□□□□ 0.34
SNHG6-201ENST00000520348 CTAGE9A4FU28 777 aa17.17■□□□□ 0.34
SNHG6-201ENST00000520348 RTN2O75298 545 aa17.17■□□□□ 0.34
SNHG6-201ENST00000520348 CYP1A1P04798 512 aaPredicted RBP17.17■□□□□ 0.34
SNHG6-201ENST00000520348 MMEP08473 750 aa17.17■□□□□ 0.34
SNHG6-201ENST00000520348 PAPD7Q5XG87 772 aaKnown RBP17.17■□□□□ 0.34
SNHG6-201ENST00000520348 TWF2Q6IBS0 349 aaKnown RBP17.17■□□□□ 0.34
SNHG6-201ENST00000520348 TMEM270Q6UE05 265 aa17.17■□□□□ 0.34
SNHG6-201ENST00000520348 TRIM72Q6ZMU5 477 aa17.17■□□□□ 0.34
SNHG6-201ENST00000520348 BEST2Q8NFU1 509 aa17.17■□□□□ 0.34
SNHG6-201ENST00000520348 RFFLQ8WZ73 363 aa17.17■□□□□ 0.34
SNHG6-201ENST00000520348 OSBPL7Q9BZF2 842 aa17.17■□□□□ 0.34
SNHG6-201ENST00000520348 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms