RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 Q6ZNX1 250 aa4.19□□□□□ -1.74
CSMD3-209ENST00000519485 GPR149Q86SP6 731 aa4.19□□□□□ -1.74
CSMD3-209ENST00000519485 SLC44A3Q8N4M1 653 aa4.19□□□□□ -1.74
CSMD3-209ENST00000519485 TFAP2CQ92754 450 aa4.19□□□□□ -1.74
CSMD3-209ENST00000519485 RNF7Q9UBF6 113 aa4.19□□□□□ -1.74
CSMD3-209ENST00000519485 APOBEC2Q9Y235 224 aaKnown RBP4.19□□□□□ -1.74
CSMD3-209ENST00000519485 ATP11BQ9Y2G3 1177 aa4.19□□□□□ -1.74
CSMD3-209ENST00000519485 MAP3K2Q9Y2U5 619 aa4.19□□□□□ -1.74
CSMD3-209ENST00000519485 KNSTRNQ9Y448 316 aa4.19□□□□□ -1.74
CSMD3-209ENST00000519485 PPP2R3BQ9Y5P8 575 aa4.19□□□□□ -1.74
CSMD3-209ENST00000519485 EIF2AK4Q9P2K8 1649 aaKnown RBP4.19□□□□□ -1.74
CSMD3-209ENST00000519485 ITSN2Q9NZM3 1697 aa4.19□□□□□ -1.74
CSMD3-209ENST00000519485 ADGRL2O95490 1459 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 POLA1P09884 1462 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-209ENST00000519485 ZNF500O60304 480 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-209ENST00000519485 BRINP1O60477 761 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 PRAMEF4O60810 478 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 LPLP06858 475 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 BPIP17213 487 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 MASP1P48740 699 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 MANFP55145 182 aaKnown RBP4.18□□□□□ -1.74
CSMD3-209ENST00000519485 NUCB2P80303 420 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 TMPRSS15P98073 1019 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 SLFN5Q08AF3 891 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 CHAF1AQ13111 956 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-209ENST00000519485 UGT8Q16880 541 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 SP5Q6BEB4 398 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-209ENST00000519485 SASS6Q6UVJ0 657 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 STRA8Q7Z7C7 330 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 SLC41A1Q8IVJ1 513 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 PDCL2Q8N4E4 241 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 SH2D3CQ8N5H7 860 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 OR14C36Q8NHC7 312 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 ZNF384Q8TF68 577 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 SYAP1Q96A49 352 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-209ENST00000519485 BOD1Q96IK1 185 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 C22orf23Q9BZE7 217 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 KIAA1586Q9HCI6 787 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 SLC17A6Q9P2U8 582 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 PRSS50Q9UI38 385 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 TMPRSS11EQ9UL52 423 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 NUP160Q12769 1436 aa4.18□□□□□ -1.74
CSMD3-209ENST00000519485 DENND4BO75064 1496 aaPredicted RBP4.18□□□□□ -1.74
CSMD3-209ENST00000519485 NESP48681 1621 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 EPRSP07814 1512 aaKnown RBP4.17□□□□□ -1.74
CSMD3-209ENST00000519485 DRGXA6NNA5 263 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 GOLGA8AA7E2F4 631 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 PLIN1O60240 522 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 TMEM127O75204 238 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 ITGA10O75578 1167 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 ZFPL1O95159 310 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 HSP90AB1P08238 724 aaKnown RBP4.17□□□□□ -1.74
CSMD3-209ENST00000519485 TSPY4P0CV99 314 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 TSPY10P0CW01 314 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 CRHR1P34998 444 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 FLT3LGP49771 235 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 LGALS4P56470 323 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 KLHL40Q2TBA0 621 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 SPDYE7PQ495Y7 208 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 B3GNTL1Q67FW5 361 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-209ENST00000519485 CLEC17AQ6ZS10 378 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 PDZD4Q76G19 769 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-209ENST00000519485 MAPKAPK5Q8IW41 473 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 SMC5Q8IY18 1101 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 TRMT2AQ8IZ69 625 aaKnown RBP4.17□□□□□ -1.74
CSMD3-209ENST00000519485 TMEM132CQ8N3T6 1108 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 CLRN3Q8NCR9 226 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 SNX33Q8WV41 574 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 EAF2Q96CJ1 260 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-209ENST00000519485 Q96MF0 132 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 ACAP3Q96P50 834 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 CCDC94Q9BW85 323 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-209ENST00000519485 TSPYL1Q9H0U9 437 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 KCTD10Q9H3F6 313 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 TOPORSQ9NS56 1045 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-209ENST00000519485 EVLQ9UI08 416 aaPredicted RBP4.17□□□□□ -1.74
CSMD3-209ENST00000519485 NOL7Q9UMY1 257 aaKnown RBP4.17□□□□□ -1.74
CSMD3-209ENST00000519485 EDARQ9UNE0 448 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 ABCC5O15440 1437 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 PIK3C2GO75747 1445 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 PLXNC1O60486 1568 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 BCORL1Q5H9F3 1711 aa4.17□□□□□ -1.74
CSMD3-209ENST00000519485 KDM5DQ9BY66 1539 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 LRRC3CA6NJW4 275 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 MGST3O14880 152 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 ELANEP08246 267 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 SCAND1P57086 179 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 CDK17Q00537 523 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 TRIM25Q14258 630 aaKnown RBP4.16□□□□□ -1.74
CSMD3-209ENST00000519485 PDCD1Q15116 288 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 PITRM1Q5JRX3 1037 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 CREBRFQ8IUR6 639 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 LYSMD2Q8IV50 215 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 FAM184AQ8NB25 1140 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 RNF169Q8NCN4 708 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 OR56A1Q8NGH5 318 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 ATL2Q8NHH9 583 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 CEP95Q96GE4 821 aa4.16□□□□□ -1.74
CSMD3-209ENST00000519485 PAWRQ96IZ0 340 aaKnown RBP4.16□□□□□ -1.74
CSMD3-209ENST00000519485 DIAPH3Q9NSV4 1193 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms