RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	CDH22	Q9UJ99	828 aa		26.25	■■□□□ 1.79
CNOT7-204	ENST00000518885	C2CD2	Q9Y426	696 aa		26.25	■■□□□ 1.79
CNOT7-204	ENST00000518885	CLUH	O75153	1309 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	C2CD4D	B7Z1M9	353 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	KIAA0391	O15091	583 aa	Known RBP	26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	RFPL2	O75678	378 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	SPAG1	Q07617	926 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	ZBTB41	Q5SVQ8	909 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	SPATA1	Q5VX52	437 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	ZNF280D	Q6N043	979 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	C7orf25	Q9BPX7	421 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	KCNH3	Q9ULD8	1083 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	PCDHB8	Q9UN66	801 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	TRIP11	Q15643	1979 aa		26.24	■■□□□ 1.79
CNOT7-204	ENST00000518885	PLXNA3	P51805	1871 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	FAM86C2P	A6NEL3	165 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	C8A	P07357	584 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	MYB	P10242	640 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	ELF1	P32519	619 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	ZXDA	P98168	799 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	MTMR3	Q13615	1198 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	JADE1	Q6IE81	842 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	SLC8B1	Q6J4K2	584 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	UBALD2	Q8IYN6	164 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	SCAND2P	Q9GZW5	306 aa	Predicted RBP	26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	HCN4	Q9Y3Q4	1203 aa		26.23	■■□□□ 1.79
CNOT7-204	ENST00000518885	DSTYK	Q6XUX3	929 aa		26.22	■■□□□ 1.79
CNOT7-204	ENST00000518885	USP37	Q86T82	979 aa		26.22	■■□□□ 1.79
CNOT7-204	ENST00000518885	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	26.22	■■□□□ 1.79	2e-6	■■■■□ 19.5
CNOT7-204	ENST00000518885	USP25	Q9UHP3	1055 aa		26.22	■■□□□ 1.79
CNOT7-204	ENST00000518885	MAFF	Q9ULX9	164 aa		26.22	■■□□□ 1.79
CNOT7-204	ENST00000518885	SORCS3	Q9UPU3	1222 aa		26.22	■■□□□ 1.79
CNOT7-204	ENST00000518885	PDCD11	Q14690	1871 aa	Known RBP	26.21	■■□□□ 1.79
CNOT7-204	ENST00000518885	EIF3D	O15371	548 aa	Known RBP eCLIP	26.21	■■□□□ 1.79
CNOT7-204	ENST00000518885	POU2F2	P09086	479 aa		26.21	■■□□□ 1.79
CNOT7-204	ENST00000518885	COL9A1	P20849	921 aa		26.21	■■□□□ 1.79
CNOT7-204	ENST00000518885	CTXN3	Q4LDR2	81 aa		26.21	■■□□□ 1.79
CNOT7-204	ENST00000518885	ZNF461	Q8TAF7	563 aa		26.21	■■□□□ 1.79
CNOT7-204	ENST00000518885	ZNF707	Q96C28	371 aa	Predicted RBP	26.21	■■□□□ 1.79
CNOT7-204	ENST00000518885	FAM213A	Q9BRX8	229 aa		26.21	■■□□□ 1.79
CNOT7-204	ENST00000518885	UBE4B	O95155	1302 aa		26.2	■■□□□ 1.79
CNOT7-204	ENST00000518885	TISP43	B9A030	160 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885		M0QZQ0	153 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	ADSS	P30520	456 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	CASP5	P51878	434 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	YWHAH	Q04917	246 aa	Predicted RBP	26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	KCNA1	Q09470	495 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	TPGS2	Q68CL5	300 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	ARMCX5	Q6P1M9	558 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	TRIM67	Q6ZTA4	783 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	UNC13D	Q70J99	1090 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	SLC7A14	Q8TBB6	771 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	LEO1	Q8WVC0	666 aa	Predicted RBP	26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	MFSD14A	Q96MC6	490 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	C11orf16	Q9NQ32	467 aa		26.2	■■□□□ 1.78
CNOT7-204	ENST00000518885	PVALEF	A0A1B0GWK0	134 aa		26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	ADAM12	O43184	909 aa		26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	SLFN14	P0C7P3	912 aa		26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	ODC1	P11926	461 aa		26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	CMA1	P23946	247 aa		26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	IGFBP6	P24592	240 aa	Predicted RBP	26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	GBP2	P32456	591 aa	Predicted RBP	26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	SIGLEC14	Q08ET2	396 aa		26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	MRPL58	Q14197	206 aa	Known RBP	26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	FAM26F	Q5R3K3	315 aa		26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	CACTIN	Q8WUQ7	758 aa	Known RBP	26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	26.19	■■□□□ 1.78
CNOT7-204	ENST00000518885	MTCL1	Q9Y4B5	1905 aa	Known RBP	26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	PRRG1	O14668	218 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	EXTL3	O43909	919 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	PRPF6	O94906	941 aa	Known RBP	26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	MYL1	P05976	194 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	NFIC	P08651	508 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	AARS	P49588	968 aa	Known RBP eCLIP	26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	ARPP19	P56211	112 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	SNRPF	P62306	86 aa	Known RBP	26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	ROR1	Q01973	937 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	KIAA1586	Q9HCI6	787 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	RBAK	Q9NYW8	714 aa	Predicted RBP	26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	IGSF9	Q9P2J2	1179 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	LIMD1	Q9UGP4	676 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	FBXL5	Q9UKA1	691 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	DSE	Q9UL01	958 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	POLI	Q9UNA4	740 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	VWA8	A3KMH1	1905 aa		26.18	■■□□□ 1.78
CNOT7-204	ENST00000518885	DENND4A	Q7Z401	1863 aa		26.17	■■□□□ 1.78
CNOT7-204	ENST00000518885	LRG1	P02750	347 aa		26.17	■■□□□ 1.78
CNOT7-204	ENST00000518885	TYMP	P19971	482 aa		26.17	■■□□□ 1.78
CNOT7-204	ENST00000518885	LILRA4	P59901	499 aa		26.17	■■□□□ 1.78
CNOT7-204	ENST00000518885	C9orf57	Q5W0N0	161 aa		26.17	■■□□□ 1.78
CNOT7-204	ENST00000518885	BRSK2	Q8IWQ3	736 aa		26.17	■■□□□ 1.78
CNOT7-204	ENST00000518885	NXPE3	Q969Y0	559 aa		26.17	■■□□□ 1.78
CNOT7-204	ENST00000518885	ZNF560	Q96MR9	790 aa		26.17	■■□□□ 1.78
CNOT7-204	ENST00000518885	DPP3	Q9NY33	737 aa		26.17	■■□□□ 1.78
CNOT7-204	ENST00000518885	TMEM221	A6NGB7	291 aa		26.16	■■□□□ 1.78
CNOT7-204	ENST00000518885	OR6C75	A6NL08	312 aa		26.16	■■□□□ 1.78
CNOT7-204	ENST00000518885		M0R296	226 aa		26.16	■■□□□ 1.78
CNOT7-204	ENST00000518885	TULP1	O00294	542 aa	Predicted RBP	26.16	■■□□□ 1.78
CNOT7-204	ENST00000518885	TBC1D4	O60343	1298 aa		26.16	■■□□□ 1.78
CNOT7-204	ENST00000518885	ABLIM3	O94929	683 aa		26.16	■■□□□ 1.78

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms