RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 AZI2Q9H6S1 392 aa6.82□□□□□ -1.32
PABPC1-207ENST00000518716 AGO4Q9HCK5 861 aaKnown RBP6.82□□□□□ -1.32
PABPC1-207ENST00000518716 IGSF9Q9P2J2 1179 aa6.82□□□□□ -1.32
PABPC1-207ENST00000518716 EPS15L1Q9UBC2 864 aa6.82□□□□□ -1.32
PABPC1-207ENST00000518716 DBR1Q9UK59 544 aaKnown RBP6.82□□□□□ -1.32
PABPC1-207ENST00000518716 PCDHA6Q9UN73 950 aa6.82□□□□□ -1.32
PABPC1-207ENST00000518716 PCDHA8Q9Y5H6 950 aa6.82□□□□□ -1.32
PABPC1-207ENST00000518716 C2orf16Q68DN1 1984 aa6.82□□□□□ -1.32
PABPC1-207ENST00000518716 IFIT3O14879 490 aaKnown RBP6.81□□□□□ -1.32
PABPC1-207ENST00000518716 EFEMP2O95967 443 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 CYP21A2P08686 494 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 DRD2P14416 443 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 ATXN1P54253 815 aaKnown RBP6.81□□□□□ -1.32
PABPC1-207ENST00000518716 GIT2Q14161 759 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 PTPN14Q15678 1187 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 LETM2Q2VYF4 491 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 CEP55Q53EZ4 464 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 TMC5Q6UXY8 1006 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 C15orf39Q6ZRI6 1047 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 CCDC60Q8IWA6 550 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-207ENST00000518716 SMC5Q8IY18 1101 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 VPS52Q8N1B4 723 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 SLC44A3Q8N4M1 653 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 CMASQ8NFW8 434 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-207ENST00000518716 KCNG4Q8TDN1 519 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 CRYGNQ8WXF5 182 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 AUTS2Q8WXX7 1259 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 NELL1Q92832 810 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 CUL5Q93034 780 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 RILPL2Q969X0 211 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 ACSF2Q96CM8 615 aaPredicted RBP6.81□□□□□ -1.32
PABPC1-207ENST00000518716 RRP36Q96EU6 259 aaKnown RBP6.81□□□□□ -1.32
PABPC1-207ENST00000518716 BORCS6Q96GS4 357 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 IGSF21Q96ID5 467 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 SFXN1Q9H9B4 322 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 GINS2Q9Y248 185 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 DOCK6Q96HP0 2047 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 PKD1L2Q7Z442 2459 aa6.81□□□□□ -1.32
PABPC1-207ENST00000518716 CEP295Q9C0D2 2601 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 NT5C1B-RDH14C9J2C7 533 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 ANHXE9PGG2 379 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 B4GALT3O60512 393 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 PLEKHA8P1O95397 391 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 DLGAP3O95886 979 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 GALTP07902 379 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 IBSPP21815 317 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-207ENST00000518716 EIF4BP23588 611 aaKnown RBP6.8□□□□□ -1.32
PABPC1-207ENST00000518716 ALDH7A1P49419 539 aaKnown RBP6.8□□□□□ -1.32
PABPC1-207ENST00000518716 CLCN4P51793 760 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 MESP2Q0VG99 397 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 UBE2SQ16763 222 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 ZNF528Q3MIS6 628 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 CCDC149Q6ZUS6 474 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 CATIPQ7Z7H3 387 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 CABP7Q86V35 215 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 PPFIBP1Q86W92 1011 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 C1orf210Q8IVY1 113 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 MB21D2Q8IYB1 491 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-207ENST00000518716 GLIS3Q8NEA6 775 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 RSAD2Q8WXG1 361 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 PIBF1Q8WXW3 757 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 RIN2Q8WYP3 895 aaPredicted RBP6.8□□□□□ -1.32
PABPC1-207ENST00000518716 RSPH1Q8WYR4 309 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 FAM168AQ92567 244 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 NXPE3Q969Y0 559 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 KLHL5Q96PQ7 755 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 LZTS2Q9BRK4 669 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 LNPKQ9C0E8 428 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 NRDE2Q9H7Z3 1164 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 TBC1D17Q9HA65 648 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 LY9Q9HBG7 655 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 LRRC4CQ9HCJ2 640 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 WDR6Q9NNW5 1121 aaKnown RBP6.8□□□□□ -1.32
PABPC1-207ENST00000518716 FBXL21Q9UKT6 434 aa6.8□□□□□ -1.32
PABPC1-207ENST00000518716 MYH9P35579 1960 aaKnown RBP6.79□□□□□ -1.32
PABPC1-207ENST00000518716 IGLV3-22A0A075B6J6 115 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-207ENST00000518716 E7EWF7 191 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 HIP1O00291 1037 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 DDAH1O94760 285 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 VTNP04004 478 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 DCNP07585 359 aaKnown RBP6.79□□□□□ -1.32
PABPC1-207ENST00000518716 CNPP09543 421 aaKnown RBP6.79□□□□□ -1.32
PABPC1-207ENST00000518716 SRFP11831 508 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 DARSP14868 501 aaKnown RBP6.79□□□□□ -1.32
PABPC1-207ENST00000518716 METAP2P50579 478 aaKnown RBP eCLIP6.79□□□□□ -1.325e-10■■■■□ 19.6
PABPC1-207ENST00000518716 NLRP11P59045 1033 aaKnown RBP6.79□□□□□ -1.32
PABPC1-207ENST00000518716 STARD6P59095 220 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 ANAPC15P60006 121 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 SWI5Q1ZZU3 235 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 TTC39BQ5VTQ0 682 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-207ENST00000518716 B4GALNT3Q6L9W6 998 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 SWSAP1Q6NVH7 229 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 ZC3H14Q6PJT7 736 aaKnown RBP6.79□□□□□ -1.32
PABPC1-207ENST00000518716 CYP26C1Q6V0L0 522 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 NIPA1Q7RTP0 329 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 ATG4DQ86TL0 474 aaPredicted RBP6.79□□□□□ -1.32
PABPC1-207ENST00000518716 ZNF654Q8IZM8 581 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 ZBTB44Q8NCP5 570 aa6.79□□□□□ -1.32
PABPC1-207ENST00000518716 HELQQ8TDG4 1101 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms