RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 ARNTLO00327 626 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 CHADO15335 359 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 NAMPTP43490 491 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 YARSP54577 528 aaKnown RBP12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 STK3Q13188 491 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 TOB2Q14106 344 aaPredicted RBP12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 SF3A2Q15428 464 aaKnown RBP12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 WDR5BQ86VZ2 330 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 RALGPS2Q86X27 583 aaPredicted RBP12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 SYNPOQ8N3V7 929 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 C3orf58Q8NDZ4 430 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 ZSWIM3Q96MP5 696 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 ARRDC1-AS1Q9H2J1 176 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 GOLGA2P5Q9HBQ8 144 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 RBM12Q9NTZ6 932 aaKnown RBP12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 RALYQ9UKM9 306 aaKnown RBP12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 NUB1Q9Y5A7 615 aa12.85□□□□□ -0.35
TMEM55A-202ENST00000518359 SPECC1L-ADORA2AF8WAN1 911 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 TM4SF5O14894 197 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 AXIN1O15169 862 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 EPN2O95208 641 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 SEC24AO95486 1093 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 EFNA5P52803 228 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 EPHA5P54756 1037 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 FCHO2Q0JRZ9 810 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 TWF1Q12792 350 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 COL9A2Q14055 689 aaPredicted RBP12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 TEAD2Q15562 447 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 CTXN3Q4LDR2 81 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 STPG1Q5TH74 334 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 EEF1DP3Q658K8 133 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 ZNF280DQ6N043 979 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 CD300LGQ6UXG3 332 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 Q6ZS52 159 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 HAUS6Q7Z4H7 955 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 HS6ST3Q8IZP7 471 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 OXER1Q8TDS5 423 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 GAB3Q8WWW8 586 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 CCDC113Q9H0I3 377 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 AFF4Q9UHB7 1163 aaKnown RBP12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 FBXL5Q9UKA1 691 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 CYP46A1Q9Y6A2 500 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 STK36Q9NRP7 1315 aa12.84□□□□□ -0.35
TMEM55A-202ENST00000518359 EML5Q05BV3 1969 aa12.83□□□□□ -0.35
TMEM55A-202ENST00000518359 ZZEF1O43149 2961 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 SDK1Q7Z5N4 2213 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 SMIM28A0A1B0GU29 152 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 MYBPHLA2RUH7 354 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 PODXLO00592 558 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 NRG2O14511 850 aaPredicted RBP12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 RPP40O75818 363 aaKnown RBP12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 REC8O95072 547 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 KCNK5O95279 499 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 CCDC192P0DO97 292 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 CPB1P15086 417 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 IGFBP6P24592 240 aaPredicted RBP12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 CTHP32929 405 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 TXKP42681 527 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 PLD1Q13393 1074 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 ARHGAP29Q52LW3 1261 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 ATF7IP2Q5U623 682 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 APPL2Q8NEU8 664 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 IFT74Q96LB3 600 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 NACC1Q96RE7 527 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 CCDC94Q9BW85 323 aaPredicted RBP12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 TUFT1Q9NNX1 390 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 CEP72Q9P209 647 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 PCDHGA5Q9Y5G8 931 aa12.83□□□□□ -0.36
TMEM55A-202ENST00000518359 ASPMQ8IZT6 3477 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 CCDC163A0A0D9SF12 145 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 DPYSL4O14531 572 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 NEMFO60524 1076 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 MOSPD3O75425 235 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 GJA1P17302 382 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 RPL9P32969 192 aaKnown RBP12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 KRT2P35908 639 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 SOX9P48436 509 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 SOX4Q06945 474 aaPredicted RBP12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 MRPL58Q14197 206 aaKnown RBP12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 ACAP1Q15027 740 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 CCDC6Q16204 474 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 RNF43Q68DV7 783 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 UNQ6494/PRO21346Q6UXR6 183 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 BSNDQ8WZ55 320 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 WASF1Q92558 559 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 LSM14BQ9BX40 385 aaKnown RBP12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 USP20Q9Y2K6 914 aa12.82□□□□□ -0.36
TMEM55A-202ENST00000518359 A0A087WWV3 80 aa12.81□□□□□ -0.36
TMEM55A-202ENST00000518359 ARHGEF35A5YM69 484 aa12.81□□□□□ -0.36
TMEM55A-202ENST00000518359 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
TMEM55A-202ENST00000518359 ATG13O75143 517 aa12.81□□□□□ -0.36
TMEM55A-202ENST00000518359 AKAP3O75969 853 aa12.81□□□□□ -0.36
TMEM55A-202ENST00000518359 EDN1P05305 212 aa12.81□□□□□ -0.36
TMEM55A-202ENST00000518359 CYP11B2P19099 503 aa12.81□□□□□ -0.36
TMEM55A-202ENST00000518359 MCM4P33991 863 aa12.81□□□□□ -0.36
TMEM55A-202ENST00000518359 GRM5P41594 1212 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms