RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 PLEKHA5Q9HAU0 1116 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 PIDD1Q9HB75 910 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 GOLGA2P5Q9HBQ8 144 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 WDR6Q9NNW5 1121 aaKnown RBP11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 FOXD4L1Q9NU39 408 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 CNTN3Q9P232 1028 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 ANKFY1Q9P2R3 1169 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 NCDNQ9UBB6 729 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 WNT16Q9UBV4 365 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 FBXO2Q9UK22 296 aaPredicted RBP11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 CA14Q9ULX7 337 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 TBX20Q9UMR3 447 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 BACE2Q9Y5Z0 518 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
PDGFRB-203ENST00000517660 PODXLO00592 558 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 STX6O43752 255 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 TBCAO75347 108 aaKnown RBP11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 PIGRP01833 764 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 ABCD1P33897 745 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 MATR3P43243 847 aaKnown RBP eCLIP11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 LIG4P49917 911 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 CEBPZQ03701 1054 aaKnown RBP11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 RAB33AQ14088 237 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 SEZ6Q53EL9 994 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 LIN9Q5TKA1 542 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 ANKS3Q6ZW76 656 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 USP49Q70CQ1 688 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 SNX21Q969T3 373 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 ZHX3Q9H4I2 956 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 MTRRQ9UBK8 725 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 STK17AQ9UEE5 414 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 FBXW11Q9UKB1 542 aa11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 MORC2Q9Y6X9 1032 aaPredicted RBP11.53□□□□□ -0.56
PDGFRB-203ENST00000517660 K7ENM7 598 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 STK25O00506 426 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 HNRNPDLO14979 420 aaKnown RBP11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 MEFVO15553 781 aaPredicted RBP11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 ADAM12O43184 909 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 HNRNPA1P09651 372 aaKnown RBP eCLIP11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 TKTP29401 623 aaKnown RBP11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 PMLP29590 882 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 OR1D2P34982 312 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 TXLNAP40222 546 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 BRCC3P46736 316 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 SLC39A14Q15043 492 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 UVSSAQ2YD98 709 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 RRAGBQ5VZM2 374 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 PHLDB3Q6NSJ2 640 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 RTL10Q7L3V2 364 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 KRI1Q8N9T8 703 aaKnown RBP11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 C3orf58Q8NDZ4 430 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 C18orf25Q96B23 403 aaPredicted RBP11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 CLIC6Q96NY7 704 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 USP28Q96RU2 1077 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 FOXQ1Q9C009 403 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 HAPLN2Q9GZV7 340 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 IGSF9Q9P2J2 1179 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 NUB1Q9Y5A7 615 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 CLUHO75153 1309 aa11.52□□□□□ -0.57
PDGFRB-203ENST00000517660 A0A0B4J269 797 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 TTC26A0AVF1 554 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 I3L4J1 428 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 SYN3O14994 580 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 C8AP07357 584 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 CXCL8P10145 99 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 NMT1P30419 496 aaKnown RBP11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 HOXA9P31269 272 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 GBP2P32456 591 aaPredicted RBP11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 GTF2BQ00403 316 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 PPM1LQ5SGD2 360 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 RSPO2Q6UXX9 243 aaPredicted RBP11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 CCDC73Q6ZRK6 1079 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 SV2BQ7L1I2 683 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 GPR161Q8N6U8 529 aaKnown RBP11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 ZBTB44Q8NCP5 570 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 TSPAN18Q96SJ8 248 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 FIZ1Q96SL8 496 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 EPC1Q9H2F5 836 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 ST6GALNAC4Q9H4F1 302 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 EPS15L1Q9UBC2 864 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 SMG5Q9UPR3 1016 aaKnown RBP11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 SIT1Q9Y3P8 196 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 CDY1Q9Y6F8 540 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
PDGFRB-203ENST00000517660 SMG1Q96Q15 3661 aaKnown RBP11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 LACTBL1A8MY62 500 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 H7C4K7 107 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 SLC30A4O14863 429 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 SPTLC1O15269 473 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 OGTO15294 1046 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 LILRB5O75023 590 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 XYLBO75191 536 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 ADRB2P07550 413 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 POU2F2P09086 479 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 PDIA4P13667 645 aaKnown RBP11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 CYP3A5P20815 502 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 LRPAP1P30533 357 aa11.5□□□□□ -0.57
PDGFRB-203ENST00000517660 NASPP49321 788 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms