RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
PDGFRB-202ENST00000517488 ELMSAN1Q6PJG2 1045 aa15.3■□□□□ 0.04
PDGFRB-202ENST00000517488 UNC13DQ70J99 1090 aa15.3■□□□□ 0.04
PDGFRB-202ENST00000517488 BEST2Q8NFU1 509 aa15.3■□□□□ 0.04
PDGFRB-202ENST00000517488 SMG7Q92540 1137 aaKnown RBP15.3■□□□□ 0.04
PDGFRB-202ENST00000517488 TSPAN18Q96SJ8 248 aa15.3■□□□□ 0.04
PDGFRB-202ENST00000517488 ASB7Q9H672 318 aa15.3■□□□□ 0.04
PDGFRB-202ENST00000517488 TMEM206Q9H813 350 aa15.3■□□□□ 0.04
PDGFRB-202ENST00000517488 NR2E1Q9Y466 385 aa15.3■□□□□ 0.04
PDGFRB-202ENST00000517488 TRIP11Q15643 1979 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 MYH15Q9Y2K3 1946 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 GOLGA8IPA6NC78 632 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 GOLGA8JA6NMD2 632 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 XPOTO43592 962 aaKnown RBP15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 TBC1D4O60343 1298 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 ZMYND10O75800 440 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 GARTP22102 1010 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 AARSP49588 968 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 POU5F1Q01860 360 aaKnown RBP15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 EHHADHQ08426 723 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 TMEM31Q5JXX7 168 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 EPM2AIP1Q7L775 607 aaPredicted RBP15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 EFCAB13Q8IY85 973 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 CEP57L1Q8IYX8 460 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 PAGE5Q96GU1 130 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 PYM1Q9BRP8 204 aaKnown RBP15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 LRFN3Q9BTN0 628 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 RHOBTB2Q9BYZ6 727 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 PRKD2Q9BZL6 878 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 PCIF1Q9H4Z3 704 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 GDPD2Q9HCC8 539 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 ZDHHC7Q9NXF8 308 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 PCDHB8Q9UN66 801 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 HPSEQ9Y251 543 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 DERAQ9Y315 318 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 ATP6V1DQ9Y5K8 247 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 TRIOO75962 3097 aa15.29■□□□□ 0.04
PDGFRB-202ENST00000517488 M0QZQ0 153 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 SPTLC1O15269 473 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 GPR37L1O60883 481 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 C8AP07357 584 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 LIN9Q5TKA1 542 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 C9orf57Q5W0N0 161 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 SLC8B1Q6J4K2 584 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 CYP26C1Q6V0L0 522 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 CCDC149Q6ZUS6 474 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 STXBP4Q6ZWJ1 553 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 TDRD5Q8NAT2 981 aaKnown RBP15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 APPL2Q8NEU8 664 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 ZNF507Q8TCN5 953 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 SCAND2PQ9GZW5 306 aaPredicted RBP15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 WDR6Q9NNW5 1121 aaKnown RBP15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 FBXL5Q9UKA1 691 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 USTQ9Y2C2 406 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 C2CD2Q9Y426 696 aa15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 TIMM13Q9Y5L4 95 aaPredicted RBP15.28■□□□□ 0.04
PDGFRB-202ENST00000517488 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 PVALEFA0A1B0GWK0 134 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 ANO9A1A5B4 782 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 H7C4K7 107 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 TULP1O00294 542 aaPredicted RBP15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 PIRO00625 290 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 EIF3DO15371 548 aaKnown RBP eCLIP15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 KLRC4O43908 158 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 EXTL3O43909 919 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 IL18RAPO95256 599 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 NDUFA8P51970 172 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 ARPP19P56211 112 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 LILRA4P59901 499 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 ROR1Q01973 937 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 CTXN3Q4LDR2 81 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 PPM1LQ5SGD2 360 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 ARMCX5Q6P1M9 558 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 BRSK2Q8IWQ3 736 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 SLC7A14Q8TBB6 771 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 NOC3LQ8WTT2 800 aaKnown RBP15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 SCFD1Q8WVM8 642 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 FAM84AQ96KN4 292 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 PIDD1Q9HB75 910 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 SLC39A2Q9NP94 309 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 DPP3Q9NY33 737 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 LIMD1Q9UGP4 676 aa15.27■□□□□ 0.04
PDGFRB-202ENST00000517488 CITO14578 2027 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 CLUHO75153 1309 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 VWA8A3KMH1 1905 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 WDR27A2RRH5 827 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 CCL16O15467 120 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 TGFB1I1O43294 461 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 ABLIM3O94929 683 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 ASGR2P07307 311 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 ZXDAP98168 799 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 PTPN21Q16825 1174 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 ZNF280DQ6N043 979 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 DSTYKQ6XUX3 929 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 OTOP3Q7RTS5 596 aa15.26■□□□□ 0.03
PDGFRB-202ENST00000517488 NELFCDQ8IXH7 590 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms