RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 LEMD2Q8NC56 503 aa15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 DNASE1L2Q92874 299 aa15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 C18orf25Q96B23 403 aaPredicted RBP15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 MCRS1Q96EZ8 462 aa15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 CORO1BQ9BR76 489 aa15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 OXCT2Q9BYC2 517 aaPredicted RBP15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 LTB4R2Q9NPC1 389 aa15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 LARSQ9P2J5 1176 aaKnown RBP15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 AFF4Q9UHB7 1163 aaKnown RBP15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 PCDHB8Q9UN66 801 aa15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 MRPS17Q9Y2R5 130 aaKnown RBP15.94■□□□□ 0.14
SCARNA20.5-201ENST00000516991 NCAM2O15394 837 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 LAMTOR5O43504 91 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 XPOTO43592 962 aaKnown RBP15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 CLTAP09496 248 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 MAPTP10636 758 aaKnown RBP15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 SLC10A6Q3KNW5 377 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 PRSS36Q5K4E3 855 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 ZBTB41Q5SVQ8 909 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 IQCEQ6IPM2 695 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TPRG1Q6ZUI0 275 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 PDZD4Q76G19 769 aaPredicted RBP15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 DDX12PQ92771 950 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 KCNN1Q92952 543 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 BICD1Q96G01 975 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 ZBTB45Q96K62 511 aaPredicted RBP15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TBC1D32Q96NH3 1257 aa15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 SPATA6Q9NWH7 488 aaPredicted RBP15.93■□□□□ 0.14
SCARNA20.5-201ENST00000516991 FAM170BA6NMN3 283 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 SFI1A8K8P3 1242 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 SPTLC1O15269 473 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 MEFVO15553 781 aaPredicted RBP15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 KINO60870 393 aaKnown RBP15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 LRRN2O75325 713 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 PLA2G4BP0C869 781 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 CPB1P15086 417 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 MARCKSP29966 332 aaPredicted RBP15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 LRPAP1P30533 357 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 MATR3P43243 847 aaKnown RBP eCLIP15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 SLC12A3P55017 1021 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 RAD51AP2Q09MP3 1159 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TMEM119Q4V9L6 283 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 CYP4A22Q5TCH4 519 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 ZNF852Q6ZMS4 543 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 AK8Q96MA6 479 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 PNMA5Q96PV4 448 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TSPAN18Q96SJ8 248 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 ZFP14Q9HCL3 533 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TUBGCP4Q9UGJ1 667 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 ODF2LQ9ULJ1 636 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 CACNA1AO00555 2505 aa15.92■□□□□ 0.14
SCARNA20.5-201ENST00000516991 VWA3AA6NCI4 1184 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 H3BQV1 296 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 SEC24AO95486 1093 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 CXCL8P10145 99 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 CYP3A5P20815 502 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 FCARP24071 287 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 RPS9P46781 194 aaKnown RBP15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 NCKAP1LP55160 1127 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 YWHAHQ04917 246 aaPredicted RBP15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 PPP2R3AQ06190 1150 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 ADCY1Q08828 1119 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 C8orf34Q49A92 452 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 RUBCNQ92622 972 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 CLDN23Q96B33 292 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 KIF12Q96FN5 646 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 ZNF512Q96ME7 567 aaPredicted RBP15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 ASB16Q96NS5 453 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 HINFPQ9BQA5 517 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 ASAH2Q9NR71 780 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 UBQLN1Q9UMX0 589 aaKnown RBP15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 PCDHGA2Q9Y5H1 932 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 F5P12259 2224 aa15.91■□□□□ 0.14
SCARNA20.5-201ENST00000516991 COL4A3Q01955 1670 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TTC26A0AVF1 554 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 M0QZQ0 153 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 MAN2B1O00754 1011 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TARSP26639 723 aaKnown RBP15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 ABCD1P33897 745 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 LIG4P49917 911 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 EPHA5P54756 1037 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TWF1Q12792 350 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 PLD1Q13393 1074 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 SEZ6Q53EL9 994 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 FAM78AQ5JUQ0 283 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TANGO2Q6ICL3 276 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 MAML2Q8IZL2 1156 aaPredicted RBP15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 BEST2Q8NFU1 509 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 DEPDC1BQ8WUY9 529 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 SMARCD2Q92925 531 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TCEAL4Q96EI5 215 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 IER2Q9BTL4 223 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 TRMT61BQ9BVS5 477 aaKnown RBP15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 PLA2G2FQ9BZM2 168 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 BRD9Q9H8M2 597 aa15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 MTF2Q9Y483 593 aaPredicted RBP15.9■□□□□ 0.14
SCARNA20.5-201ENST00000516991 OR6C75A6NL08 312 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 HNRNPDLO14979 420 aaKnown RBP15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 OGTO15294 1046 aa15.89■□□□□ 0.13
SCARNA20.5-201ENST00000516991 OAZ2O95190 189 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms