RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 RECQL4O94761 1208 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 TFRCP02786 760 aaKnown RBP9.82□□□□□ -0.84
CPNE4-213ENST00000515418 TUBB4AP04350 444 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 CFHP08603 1231 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 IBSPP21815 317 aaPredicted RBP9.82□□□□□ -0.84
CPNE4-213ENST00000515418 AXLP30530 894 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 POLR2BP30876 1174 aaKnown RBP9.82□□□□□ -0.84
CPNE4-213ENST00000515418 RAP1GAPP47736 663 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 GALCP54803 685 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 NAP1L1P55209 391 aaKnown RBP9.82□□□□□ -0.84
CPNE4-213ENST00000515418 CDH8P55286 799 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 PRMT2P55345 433 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 MGAT3Q09327 533 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 KYAT1Q16773 422 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 ZNF699Q32M78 642 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 WDR72Q3MJ13 1102 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 ALKAL1Q6UXT8 129 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 ENOSF1Q7L5Y1 443 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 SMG8Q8ND04 991 aaKnown RBP9.82□□□□□ -0.84
CPNE4-213ENST00000515418 DDX1Q92499 740 aaKnown RBP9.82□□□□□ -0.84
CPNE4-213ENST00000515418 SECISBP2LQ93073 1101 aaKnown RBP9.82□□□□□ -0.84
CPNE4-213ENST00000515418 IMPG2Q9BZV3 1241 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 DPP3Q9NY33 737 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 CHORDC1Q9UHD1 332 aaPredicted RBP9.82□□□□□ -0.84
CPNE4-213ENST00000515418 AGAP1Q9UPQ3 857 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 PTPN22Q9Y2R2 807 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 IPPQ9Y573 584 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 CAPN6Q9Y6Q1 641 aa9.82□□□□□ -0.84
CPNE4-213ENST00000515418 MOXD2PA6NHM9 499 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 PPEF2O14830 753 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 CABYRO75952 493 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 GHRP10912 638 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 ABCB4P21439 1286 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 CD52P31358 61 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 FMO1Q01740 532 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 PCBP1Q15365 356 aaKnown RBP eCLIP9.81□□□□□ -0.84
CPNE4-213ENST00000515418 ZNF618Q5T7W0 954 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 TSC1Q92574 1164 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 SNX27Q96L92 541 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 DEFB118Q96PH6 123 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 STARD7Q9NQZ5 370 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 WBP1LQ9NX94 342 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 PADI3Q9ULW8 664 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 SMIM28A0A1B0GU29 152 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 FTLP02792 175 aaPredicted RBP9.81□□□□□ -0.84
CPNE4-213ENST00000515418 H2AFZP0C0S5 128 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 ASPAP45381 313 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 AFF1P51825 1210 aaKnown RBP9.81□□□□□ -0.84
CPNE4-213ENST00000515418 YARSP54577 528 aaKnown RBP9.81□□□□□ -0.84
CPNE4-213ENST00000515418 POU5F1Q01860 360 aaKnown RBP9.81□□□□□ -0.84
CPNE4-213ENST00000515418 PTK7Q13308 1070 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 ORC1Q13415 861 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 TRIM71Q2Q1W2 868 aaKnown RBP9.81□□□□□ -0.84
CPNE4-213ENST00000515418 H2AFVQ71UI9 128 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 APBB1IPQ7Z5R6 666 aaPredicted RBP9.81□□□□□ -0.84
CPNE4-213ENST00000515418 FMNL3Q8IVF7 1028 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 LPPQ93052 612 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 HPDLQ96IR7 371 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 TSEN34Q9BSV6 310 aaKnown RBP9.81□□□□□ -0.84
CPNE4-213ENST00000515418 TSGA10Q9BZW7 698 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 NIF3L1Q9GZT8 377 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 PLEKHA5Q9HAU0 1116 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 CISHQ9NSE2 258 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 TUBGCP4Q9UGJ1 667 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 PCDHB2Q9Y5E7 798 aa9.81□□□□□ -0.84
CPNE4-213ENST00000515418 KIAA0100Q14667 2235 aaKnown RBP9.8□□□□□ -0.84
CPNE4-213ENST00000515418 CTAGE9A4FU28 777 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 MGEA5O60502 916 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 ATP1A1P05023 1023 aaKnown RBP9.8□□□□□ -0.84
CPNE4-213ENST00000515418 HSPA6P17066 643 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 TBXAS1P24557 533 aaPredicted RBP9.8□□□□□ -0.84
CPNE4-213ENST00000515418 PDE6CP51160 858 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 CDR2Q01850 454 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 LPIN1Q14693 890 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 ZBTB6Q15916 424 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 FBXO47Q5MNV8 452 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 RPAINQ86UA6 219 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 ZNF710Q8N1W2 664 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 RBBP8NLQ8NC74 664 aaPredicted RBP9.8□□□□□ -0.84
CPNE4-213ENST00000515418 LRRN4CLQ8ND94 238 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 ZFP42Q96MM3 310 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 THAP2Q9H0W7 228 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 RNF208Q9H0X6 261 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 SDCBP2Q9H190 292 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 GOLPH3Q9H4A6 298 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 GOLGA2P5Q9HBQ8 144 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 LUC7LQ9NQ29 371 aaKnown RBP9.8□□□□□ -0.84
CPNE4-213ENST00000515418 MYO1AQ9UBC5 1043 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 PUF60Q9UHX1 559 aaKnown RBP9.8□□□□□ -0.84
CPNE4-213ENST00000515418 C2CD2Q9Y426 696 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 FRMPD3Q5JV73 1810 aa9.8□□□□□ -0.84
CPNE4-213ENST00000515418 KBTBD13C9JR72 458 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 NCK2O43639 380 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 SRGAP2O75044 1071 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 CKBP12277 381 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 CCL5P13501 91 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 IGFBP6P24592 240 aaPredicted RBP9.79□□□□□ -0.84
CPNE4-213ENST00000515418 ANXA13P27216 316 aa9.79□□□□□ -0.84
CPNE4-213ENST00000515418 NOP2P46087 812 aaKnown RBP9.79□□□□□ -0.84
CPNE4-213ENST00000515418 RBP5P82980 135 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms