RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 PPFIBP1Q86W92 1011 aa18.09■□□□□ 0.49
AP3S1-208ENST00000515066 KAT5Q92993 513 aa18.09■□□□□ 0.49
AP3S1-208ENST00000515066 KREMEN1Q96MU8 473 aa18.09■□□□□ 0.49
AP3S1-208ENST00000515066 NT5C1BQ96P26 610 aa18.09■□□□□ 0.49
AP3S1-208ENST00000515066 EDEM3Q9BZQ6 932 aa18.09■□□□□ 0.49
AP3S1-208ENST00000515066 AGAP1Q9UPQ3 857 aa18.09■□□□□ 0.49
AP3S1-208ENST00000515066 PCDHB7Q9Y5E2 793 aa18.09■□□□□ 0.49
AP3S1-208ENST00000515066 PIRO00625 290 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 XPOTO43592 962 aaKnown RBP18.08■□□□□ 0.48
AP3S1-208ENST00000515066 LRPAP1P30533 357 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 GATMP50440 423 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 WDR5P61964 334 aaKnown RBP18.08■□□□□ 0.48
AP3S1-208ENST00000515066 FPGSQ05932 587 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 PPIGQ13427 754 aaKnown RBP eCLIP18.08■□□□□ 0.48
AP3S1-208ENST00000515066 TRPC3Q13507 836 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 SGSM1Q2NKQ1 1148 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 E4F1Q66K89 784 aaPredicted RBP18.08■□□□□ 0.48
AP3S1-208ENST00000515066 RRAGAQ7L523 313 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 NPAS4Q8IUM7 802 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 TNS4Q8IZW8 715 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 CASD1Q96PB1 797 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 DNAJC7Q99615 494 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 ARID3AQ99856 593 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 GPR88Q9GZN0 384 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 VRTNQ9H8Y1 702 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 SLC38A7Q9NVC3 462 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 DNAJC12Q9UKB3 198 aa18.08■□□□□ 0.48
AP3S1-208ENST00000515066 ZMYND8Q9ULU4 1186 aaPredicted RBP18.08■□□□□ 0.48
AP3S1-208ENST00000515066 LUC7L2Q9Y383 392 aaKnown RBP18.08■□□□□ 0.48
AP3S1-208ENST00000515066 TNRC18O15417 2968 aaPredicted RBP18.08■□□□□ 0.48
AP3S1-208ENST00000515066 AKR1B15C9JRZ8 316 aaPredicted RBP18.07■□□□□ 0.48
AP3S1-208ENST00000515066 RFX1P22670 979 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 KRT9P35527 623 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 GSDMDP57764 484 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 DEFB103AP81534 67 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 RBP5P82980 135 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 ZBED6P86452 979 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 GCNT1Q02742 428 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 ZNF699Q32M78 642 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 NOMO2Q5JPE7 1267 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 CNGA4Q8IV77 575 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 PPM1KQ8N3J5 372 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 PAAF1Q9BRP4 392 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 IMPG2Q9BZV3 1241 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 UBE2TQ9NPD8 197 aaPredicted RBP18.07■□□□□ 0.48
AP3S1-208ENST00000515066 TSC2P49815 1807 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 KIAA1671Q9BY89 1806 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 PDE4DIPQ5VU43 2346 aa18.07■□□□□ 0.48
AP3S1-208ENST00000515066 GOLGA6L6A8MZA4 724 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 BAIAP3O94812 1187 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 STAU1O95793 577 aaKnown RBP18.06■□□□□ 0.48
AP3S1-208ENST00000515066 IGFBP6P24592 240 aaPredicted RBP18.06■□□□□ 0.48
AP3S1-208ENST00000515066 DSC1Q08554 894 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 WDR44Q5JSH3 913 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 OTOP2Q7RTS6 562 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 HPDLQ96IR7 371 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 ABHD10Q9NUJ1 306 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 TBC1D13Q9NVG8 400 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 LRFN2Q9ULH4 789 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 DAAM1Q9Y4D1 1078 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 LRRC53A6NM62 1247 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 F8VZ95 297 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 EFCAB14O75071 495 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 PNMA6AP0CW24 399 aaPredicted RBP18.06■□□□□ 0.48
AP3S1-208ENST00000515066 ATICP31939 592 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 ASPAP45381 313 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 RAPGEF1Q13905 1077 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 TMEM240Q5SV17 173 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 PDXDC1Q6P996 788 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 ZNF365Q70YC5 407 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 CACNA2D4Q7Z3S7 1137 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 LRRC52Q8N7C0 313 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 C3orf58Q8NDZ4 430 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 TAF4BQ92750 862 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 TOP1MTQ969P6 601 aa18.06■□□□□ 0.48
AP3S1-208ENST00000515066 VWA8A3KMH1 1905 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 CASTOR2A6NHX0 329 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 SPTLC1O15269 473 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 DDHD2O94830 711 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 TPM1P09493 284 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 CLCNKBP51801 687 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 TUSC3Q13454 348 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 CUL2Q13617 745 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 DRAP1Q14919 205 aaPredicted RBP18.05■□□□□ 0.48
AP3S1-208ENST00000515066 UPP1Q16831 310 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 WDR72Q3MJ13 1102 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 TMCO2Q7Z6W1 182 aaPredicted RBP18.05■□□□□ 0.48
AP3S1-208ENST00000515066 ZNF280BQ86YH2 543 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 LRRC8AQ8IWT6 810 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 CCDC150Q8NCX0 1101 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 SHC3Q92529 594 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 DPF3Q92784 378 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.05■□□□□ 0.48
AP3S1-208ENST00000515066 STK33Q9BYT3 514 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 NIF3L1Q9GZT8 377 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 RC3H2Q9HBD1 1191 aaKnown RBP18.05■□□□□ 0.48
AP3S1-208ENST00000515066 HCSTQ9UBK5 93 aa18.05■□□□□ 0.48
AP3S1-208ENST00000515066 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.05■□□□□ 0.48
AP3S1-208ENST00000515066 HOXA2O43364 376 aa18.04■□□□□ 0.48
AP3S1-208ENST00000515066 DGKIO75912 1065 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms