RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 GTF2H1P32780 548 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 STRN3Q13033 797 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 LAMB3Q13751 1172 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 BRDTQ58F21 947 aaPredicted RBP13.38□□□□□ -0.27
SDHA-216ENST00000514027 DCAF15Q66K64 600 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 CWF19L1Q69YN2 538 aaKnown RBP13.38□□□□□ -0.27
SDHA-216ENST00000514027 SPOPLQ6IQ16 392 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 C1orf54Q8WWF1 131 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 TMEM143Q96AN5 459 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 EPB41L4BQ9H329 900 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 NOD2Q9HC29 1040 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 CNOT7Q9UIV1 285 aaKnown RBP13.38□□□□□ -0.27
SDHA-216ENST00000514027 ZNF214Q9UL59 606 aaPredicted RBP13.38□□□□□ -0.27
SDHA-216ENST00000514027 PASKQ96RG2 1323 aa13.38□□□□□ -0.27
SDHA-216ENST00000514027 LRRIQ4A6NIV6 560 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 DNM1LO00429 736 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 MAFGO15525 162 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 ECEL1O95672 775 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 GARTP22102 1010 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 GCNT1Q02742 428 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 SLC29A2Q14542 456 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 SLMAPQ14BN4 828 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 EMC2Q15006 297 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 GNPTABQ3T906 1256 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 WDR44Q5JSH3 913 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 DAB2IPQ5VWQ8 1189 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 PASD1Q8IV76 773 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 REPS2Q8NFH8 660 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 ZNF516Q92618 1163 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 EZH1Q92800 747 aaPredicted RBP13.37□□□□□ -0.27
SDHA-216ENST00000514027 RNF25Q96BH1 459 aaPredicted RBP13.37□□□□□ -0.27
SDHA-216ENST00000514027 TBC1D31Q96DN5 1066 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 SELENOSQ9BQE4 189 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 OSBPL7Q9BZF2 842 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 SEMA4AQ9H3S1 761 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 CYP39A1Q9NYL5 469 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 ANKFY1Q9P2R3 1169 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 PARP2Q9UGN5 583 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 GMNCA6NCL1 334 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 LIN7AO14910 233 aaPredicted RBP13.37□□□□□ -0.27
SDHA-216ENST00000514027 GRIN3BO60391 1043 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 HARSP12081 509 aaKnown RBP13.37□□□□□ -0.27
SDHA-216ENST00000514027 DSG3P32926 999 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 SLCO1A2P46721 670 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 DRG2P55039 364 aaKnown RBP13.37□□□□□ -0.27
SDHA-216ENST00000514027 WNT7BP56706 349 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 NLRP11P59045 1033 aaKnown RBP13.37□□□□□ -0.27
SDHA-216ENST00000514027 SGO2Q562F6 1265 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 SPDYCQ5MJ68 293 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 SPATA21Q7Z572 469 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
SDHA-216ENST00000514027 MDM1Q8TC05 714 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 CYFIP2Q96F07 1278 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 AZI2Q9H6S1 392 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 ACAD9Q9H845 621 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 ARHGAP28Q9P2N2 729 aa13.37□□□□□ -0.27
SDHA-216ENST00000514027 SRRM3A6NNA2 597 aaPredicted RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 NFKBIEO00221 500 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 EXTL3O43909 919 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 ZBTB7AO95365 584 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 HLA-DRAP01903 254 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 RRM1P23921 792 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 RPS12P25398 132 aaKnown RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 MAGEA8P43361 318 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 NSFP46459 744 aaKnown RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 SCTRP47872 440 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 PRKG1Q13976 671 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 SIX1Q15475 284 aaPredicted RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 ENOSF1Q7L5Y1 443 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 TAX1BP1Q86VP1 789 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 ATG4AQ8WYN0 398 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 CDHR1Q96JP9 859 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 TEX13BQ9BXU2 312 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 AGO2Q9UKV8 859 aaKnown RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 MYH9P35579 1960 aaKnown RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 RGS16O15492 202 aaPredicted RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 TRAPPC3O43617 180 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 NUDT17P0C025 328 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 SUPT20HL2P0C7V6 817 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 PYGBP11216 843 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 GBP1P32455 592 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 GJC1P36383 396 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 KRT17Q04695 432 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 CALCOCO2Q13137 446 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 CYP1B1Q16678 543 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 SUPT20HL1Q3ZLR7 823 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 TDRD10Q5VZ19 366 aaKnown RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 CRELD2Q6UXH1 353 aaPredicted RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 ABHD15Q6UXT9 468 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 MCOLN2Q8IZK6 566 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 B4GALNT2Q8NHY0 566 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 DEPTORQ8TB45 409 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 EPS8L3Q8TE67 593 aaKnown RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 PSPC1Q8WXF1 523 aaKnown RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 RAPGEF5Q92565 580 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 ZBTB45Q96K62 511 aaPredicted RBP13.36□□□□□ -0.27
SDHA-216ENST00000514027 CCDC113Q9H0I3 377 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 PDLIM7Q9NR12 457 aa13.36□□□□□ -0.27
SDHA-216ENST00000514027 ASIC3Q9UHC3 531 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms