RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 FAM47DPA6NHR8 397 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 CYP1A2P05177 515 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 GSTA1P08263 222 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 CENPCQ03188 943 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 PDIA2Q13087 525 aaKnown RBP12.17□□□□□ -0.46
CTNND2-215ENST00000513588 MTMR2Q13614 643 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 RTKN2Q8IZC4 609 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 C4orf33Q8N1A6 199 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 VPS52Q8N1B4 723 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 ZSWIM2Q8NEG5 633 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 SEMA4DQ92854 862 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 ART4Q93070 314 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 TRABDQ9H4I3 376 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 AS3MTQ9HBK9 375 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 JPH1Q9HDC5 661 aaPredicted RBP12.17□□□□□ -0.46
CTNND2-215ENST00000513588 ABCF3Q9NUQ8 709 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 GRHL1Q9NZI5 618 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 RNF8O76064 485 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 TBXAS1P24557 533 aaPredicted RBP12.17□□□□□ -0.46
CTNND2-215ENST00000513588 ELF1P32519 619 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 PEX19P40855 299 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 PTGIRP43119 386 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 BASP1P80723 227 aaKnown RBP12.17□□□□□ -0.46
CTNND2-215ENST00000513588 MXRA7P84157 204 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 EMC10Q5UCC4 262 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 SPOPLQ6IQ16 392 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 ZDHHC24Q6UX98 284 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 EXOC3L1Q86VI1 746 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 CPNE8Q86YQ8 564 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 GRAMD1AQ96CP6 724 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 FAM84AQ96KN4 292 aa12.17□□□□□ -0.46
CTNND2-215ENST00000513588 PAEPP09466 180 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 MSH2P43246 934 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 OSTNP61366 133 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 PRKCEQ02156 737 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 RRP1BQ14684 758 aaKnown RBP12.16□□□□□ -0.46
CTNND2-215ENST00000513588 ZNF677Q86XU0 584 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 CALN1Q9BXU9 219 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 DCLK3Q9C098 648 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 LRRC19Q9H756 370 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 NRBP2Q9NSY0 501 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 SLC9A2Q9UBY0 812 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 USP20Q9Y2K6 914 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 NOP56O00567 594 aaKnown RBP12.16□□□□□ -0.46
CTNND2-215ENST00000513588 PROSCO94903 275 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 KRT10P13645 584 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 COPS2P61201 443 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 YWHAGP61981 247 aaKnown RBP eCLIP12.16□□□□□ -0.46
CTNND2-215ENST00000513588 C6orf163Q5TEZ5 329 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 RFX6Q8HWS3 928 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 ZBTB8OSQ8IWT0 167 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 SENP7Q9BQF6 1050 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 PDCD2LQ9BRP1 358 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 RPTORQ8N122 1335 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 SNX3O60493 162 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 TNNC2P02585 160 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 CALB1P05937 261 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 PSMA2P25787 234 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 GPC3P51654 580 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 DNAJC3Q13217 504 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 DAB2IPQ5VWQ8 1189 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 DCAF15Q66K64 600 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 CCDC62Q6P9F0 684 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 MAP4K3Q8IVH8 894 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 STMN2Q93045 179 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 YY1AP1Q9H869 796 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 C17orf75Q9HAS0 396 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 NAALADL1Q9UQQ1 740 aa12.16□□□□□ -0.46
CTNND2-215ENST00000513588 MAST2Q6P0Q8 1798 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 EXTL3O43909 919 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 GTF2H1P32780 548 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 CHKAP35790 457 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 YWHAEP62258 255 aaKnown RBP12.15□□□□□ -0.46
CTNND2-215ENST00000513588 NOP14P78316 857 aaKnown RBP12.15□□□□□ -0.46
CTNND2-215ENST00000513588 NFX1Q12986 1120 aaKnown RBP12.15□□□□□ -0.46
CTNND2-215ENST00000513588 ANKMY2Q8IV38 441 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 PDIK1LQ8N165 341 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 CCT6BQ92526 530 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 DCTN3O75935 186 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 DNAJC8O75937 253 aaPredicted RBP12.15□□□□□ -0.46
CTNND2-215ENST00000513588 SRGAP2CP0DJJ0 459 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 NQO1P15559 274 aaKnown RBP12.15□□□□□ -0.46
CTNND2-215ENST00000513588 HADHBP55084 474 aaKnown RBP12.15□□□□□ -0.46
CTNND2-215ENST00000513588 GCNT1Q02742 428 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 MTM1Q13496 603 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 UGCGQ16739 394 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 NIPA1Q7RTP0 329 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 C12orf56Q8IXR9 622 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 RCOR2Q8IZ40 523 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 TMEM161BQ8NDZ6 487 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 ERP27Q96DN0 273 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 PWWP2AQ96N64 755 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 MCEEQ96PE7 176 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 TARS2Q9BW92 718 aaKnown RBP12.15□□□□□ -0.46
CTNND2-215ENST00000513588 NINJ2Q9NZG7 142 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 FSCN2O14926 492 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 ATP6V1G2O95670 118 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 INHBAP08476 426 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 CHRNB2P17787 502 aa12.15□□□□□ -0.46
CTNND2-215ENST00000513588 PEX5P50542 639 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms