RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 PDE11AQ9HCR9 933 aa14.08□□□□□ -0.16
DEPDC1B-206ENST00000512452 CPSF3Q9UKF6 684 aaKnown RBP14.08□□□□□ -0.16
DEPDC1B-206ENST00000512452 PKD1L2Q7Z442 2459 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 H3BRB1 525 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 MTA2O94776 668 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 EDN1P05305 212 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 MMP3P08254 477 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 SMPD1P17405 629 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 NOP2P46087 812 aaKnown RBP14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 PDE6CP51160 858 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 EPHB4P54760 987 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 MBTD1Q05BQ5 628 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 RPS6KA1Q15418 735 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 CFAP221Q4G0U5 840 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 ATF7IP2Q5U623 682 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 TDRD10Q5VZ19 366 aaKnown RBP14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 TMCO3Q6UWJ1 677 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 ZNF410Q86VK4 478 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 MMGT1Q8N4V1 131 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 METTL13Q8N6R0 699 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 NPLOC4Q8TAT6 608 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 HNRNPLLQ8WVV9 542 aaKnown RBP14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 SOCS4Q8WXH5 440 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 USP6NLQ92738 828 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 TAF4BQ92750 862 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 MMS19Q96T76 1030 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 TCHPQ9BT92 498 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 PARD6BQ9BYG5 372 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 IMPG2Q9BZV3 1241 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 CD320Q9NPF0 282 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 CNTN6Q9UQ52 1028 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 Q9Y3F1 56 aa14.07□□□□□ -0.16
DEPDC1B-206ENST00000512452 A6NJR5 290 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 INO80B-WBP1J3KQ70 363 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 CYP26A1O43174 497 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 ZEB2O60315 1214 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 B4GALT4O60513 344 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 ERLIN1O75477 346 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 MCF2P10911 925 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 CYP11B1P15538 503 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 ZSCAN20P17040 1043 aaPredicted RBP14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 PBX2P40425 430 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 CLCN3P51790 818 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 CLCN6P51797 869 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 BIRC3Q13489 604 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 PCBP1Q15365 356 aaKnown RBP eCLIP14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 TMEM63BQ5T3F8 832 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 CCDC181Q5TID7 509 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 WDR93Q6P2C0 686 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 MTHFD1LQ6UB35 978 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 TRIM72Q6ZMU5 477 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 NOP9Q86U38 636 aaKnown RBP14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 RPUSD2Q8IZ73 545 aaKnown RBP14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 TRAPPC12Q8WVT3 735 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 HERVK_113Q902F9 699 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 KAT5Q92993 513 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 TATDN2Q93075 761 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 INO80BQ9C086 356 aaPredicted RBP14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 ANKZF1Q9H8Y5 726 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 ABCB6Q9NP58 842 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 ZHX1Q9UKY1 873 aaPredicted RBP14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 PCDHB2Q9Y5E7 798 aa14.06□□□□□ -0.16
DEPDC1B-206ENST00000512452 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 GFRA3O60609 400 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 SRGAP2O75044 1071 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 KIF4AO95239 1232 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 VNN1O95497 513 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 CLTAP09496 248 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 CHRNB2P17787 502 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 CCND3P30281 292 aaPredicted RBP14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 USP8P40818 1118 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 RGS2P41220 211 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 GPC5P78333 572 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 PPFIA1Q13136 1202 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 CUL2Q13617 745 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 NCOA4Q13772 614 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 CLUL1Q15846 466 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 GRIK4Q16099 956 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 DUOXA2Q1HG44 320 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 ZNF568Q3ZCX4 644 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 GLE1Q53GS7 698 aaKnown RBP14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 GJC2Q5T442 439 aaPredicted RBP14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 C11orf63Q6NUN7 778 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 NFRKBQ6P4R8 1299 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 APBB1IPQ7Z5R6 666 aaPredicted RBP14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 SLC20A1Q8WUM9 679 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 TRIM11Q96F44 468 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 NLRP4Q96MN2 994 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 SELENOOQ9BVL4 669 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 CCDC94Q9BW85 323 aaPredicted RBP14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 PBX4Q9BYU1 374 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 IFT122Q9HBG6 1241 aa14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 GNEQ9Y223 722 aaKnown RBP14.05□□□□□ -0.16
DEPDC1B-206ENST00000512452 TRIM43BA6NCK2 446 aa14.04□□□□□ -0.16
DEPDC1B-206ENST00000512452 PDE2AO00408 941 aaPredicted RBP14.04□□□□□ -0.16
DEPDC1B-206ENST00000512452 PHACTR2O75167 634 aa14.04□□□□□ -0.16
DEPDC1B-206ENST00000512452 ASS1P00966 412 aaKnown RBP14.04□□□□□ -0.16
DEPDC1B-206ENST00000512452 IGHA2P01877 340 aa14.04□□□□□ -0.16
DEPDC1B-206ENST00000512452 FTLP02792 175 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms