RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 ELF2Q15723 593 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 COL28A1Q2UY09 1125 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 SHKBP1Q8TBC3 707 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 FAM200AQ8TCP9 573 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 ASAP3Q8TDY4 903 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 TBCKQ8TEA7 893 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 LRRC3BQ96PB8 259 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 LSG1Q9H089 658 aaKnown RBP13.25□□□□□ -0.29
COPS4-210ENST00000511708 CYP4F11Q9HBI6 524 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 VAV3Q9UKW4 847 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 SLC8A2Q9UPR5 921 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 PLXNB3Q9ULL4 1909 aa13.25□□□□□ -0.29
COPS4-210ENST00000511708 TNRC6BQ9UPQ9 1833 aaKnown RBP13.25□□□□□ -0.29
COPS4-210ENST00000511708 PTPRDP23468 1912 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 KHNYNO15037 678 aaKnown RBP13.24□□□□□ -0.29
COPS4-210ENST00000511708 PRPF3O43395 683 aaKnown RBP13.24□□□□□ -0.29
COPS4-210ENST00000511708 ATG13O75143 517 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 RECQL4O94761 1208 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 B3GAT3O94766 335 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 MYL4P12829 197 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
COPS4-210ENST00000511708 KARSQ15046 597 aaKnown RBP13.24□□□□□ -0.29
COPS4-210ENST00000511708 ARHGAP29Q52LW3 1261 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 CREB3L3Q68CJ9 461 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 TPGS2Q68CL5 300 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 IQCEQ6IPM2 695 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 MOXD1Q6UVY6 613 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 C3orf58Q8NDZ4 430 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 TTC8Q8TAM2 541 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 ADAM32Q8TC27 787 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 ZNF512Q96ME7 567 aaPredicted RBP13.24□□□□□ -0.29
COPS4-210ENST00000511708 LRRC3Q9BY71 257 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 CFAP46Q8IYW2 2715 aa13.24□□□□□ -0.29
COPS4-210ENST00000511708 KLF18A0A0U1RQI7 1052 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 PATE3B3GLJ2 98 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 I3L4J1 428 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 ZBTB39O15060 712 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 DCLK1O15075 740 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 PRKCBP05771 671 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 ARL2P36404 184 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 BRCC3P46736 316 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 CLCNKBP51801 687 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 UPP1Q16831 310 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 XKR9Q5GH70 373 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 OTUD6AQ7L8S5 288 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 ELMOD1Q8N336 334 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 CCDC148Q8NFR7 591 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 ZFYVE19Q96K21 471 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 TMEM209Q96SK2 561 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 LXNQ9BS40 222 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 MKNK1Q9BUB5 465 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 ASAH2Q9NR71 780 aa13.23□□□□□ -0.29
COPS4-210ENST00000511708 POLR3BQ9NW08 1133 aaPredicted RBP13.23□□□□□ -0.29
COPS4-210ENST00000511708 URB1O60287 2271 aaKnown RBP13.23□□□□□ -0.29
COPS4-210ENST00000511708 TBX3O15119 743 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 TRAPPC3O43617 180 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 GLRA2P23416 452 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 IRX4P78413 519 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
COPS4-210ENST00000511708 TWF1Q12792 350 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 AAMPQ13685 434 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 MRPL58Q14197 206 aaKnown RBP13.22□□□□□ -0.29
COPS4-210ENST00000511708 TMEM196Q5HYL7 178 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 PMS2CLQ68D20 193 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 FSTL4Q6MZW2 842 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 PIP4P1Q86T03 277 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 POTEDQ86YR6 584 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 ARID3BQ8IVW6 561 aaPredicted RBP13.22□□□□□ -0.29
COPS4-210ENST00000511708 CHFRQ96EP1 664 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 PPP1R10Q96QC0 940 aaKnown RBP13.22□□□□□ -0.29
COPS4-210ENST00000511708 SLITRK6Q9H5Y7 841 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 OBP2AQ9NY56 170 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 EBF1Q9UH73 591 aa13.22□□□□□ -0.29
COPS4-210ENST00000511708 SHROOM3Q8TF72 1996 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 DENND4CQ5VZ89 1909 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 SPAARA0A1B0GVQ0 90 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 CYSRT1A8MQ03 144 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 H0Y626 953 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 MEFVO15553 781 aaPredicted RBP13.21□□□□□ -0.29
COPS4-210ENST00000511708 TRIM16O95361 564 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 TNK2Q07912 1038 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 EPHA7Q15375 998 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 FAM187BQ17R55 369 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 UAP1L1Q3KQV9 507 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 STXBP5Q5T5C0 1151 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 HAUS6Q7Z4H7 955 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 TMC8Q8IU68 726 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 GLIS3Q8NEA6 775 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 UROC1Q96N76 676 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 HHIPQ96QV1 700 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 C22orf23Q9BZE7 217 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 SLC32A1Q9H598 525 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 PDZD7Q9H5P4 517 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 KCNMB3Q9NPA1 279 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 RGL1Q9NZL6 768 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 VPS54Q9P1Q0 977 aa13.21□□□□□ -0.29
COPS4-210ENST00000511708 AFF4Q9UHB7 1163 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms