RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 HIST1H2AHQ96KK5 128 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 HIST1H2AJQ99878 128 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 SOX7Q9BT81 388 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 KCTD10Q9H3F6 313 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 MMRN2Q9H8L6 949 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 CCM2LQ9NUG4 571 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 POLR3BQ9NW08 1133 aaPredicted RBP4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 MAGEL2Q9UJ55 1249 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 SYNPO2Q9UMS6 1093 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 SLIT3O75094 1523 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 PPIP5K1Q6PFW1 1433 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 TNKSO95271 1327 aa4.7□□□□□ -1.66
TOPBP1-208ENST00000511439 LY75O60449 1722 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 CASP8AP2Q9UKL3 1982 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 BRCA1P38398 1863 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 CCDC7Q96M83 1385 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 FZD9O00144 591 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 CFBP00751 764 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 HMGB1P09429 215 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 KRT85P78386 507 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 MRPS9P82933 396 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 ABCB5Q2M3G0 1257 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 PLEKHG6Q3KR16 790 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 MRGPRGQ86SM5 289 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 OR14C36Q8NHC7 312 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 GAB3Q8WWW8 586 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 GCDHQ92947 438 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 NKD2Q969F2 451 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 MIEF2Q96C03 454 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 TMEM176AQ96HP8 235 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 FAXDC2Q96IV6 333 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 WDR92Q96MX6 357 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 CEP72Q9P209 647 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 EVLQ9UI08 416 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 USP18Q9UMW8 372 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 EDARQ9UNE0 448 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 REXO2Q9Y3B8 237 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 SPEF1Q9Y4P9 236 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 ANKRD50Q9ULJ7 1429 aa4.69□□□□□ -1.66
TOPBP1-208ENST00000511439 C5P01031 1676 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 SHTN1A0MZ66 631 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 PPFIA2O75334 1257 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 SEC24DO94855 1032 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 MT-CO1P00395 513 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 MYBL2P10244 700 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 RBP3P10745 1247 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 MTHFD2P13995 350 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 MTNR1BP49286 362 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 ADCY7P51828 1080 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 LGALS4P56470 323 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 PPARAQ07869 468 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 ADAM15Q13444 863 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 CNGB1Q14028 1251 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 SPIDRQ14159 915 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 RRP1BQ14684 758 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 TOR2AQ5JU69 321 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 FNDC7Q5VTL7 733 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 PGM2L1Q6PCE3 622 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 GAREM2Q75VX8 874 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 CTU1Q7Z7A3 348 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 GSPT2Q8IYD1 628 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 AUTS2Q8WXX7 1259 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 FUBP3Q96I24 572 aaKnown RBP eCLIP4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 SMAD5Q99717 465 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 FDXACB1Q9BRP7 624 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 OSBPL6Q9BZF3 934 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 SLC13A1Q9BZW2 595 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 QRSL1Q9H0R6 528 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 AGO3Q9H9G7 860 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 DNAJC28Q9NX36 388 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 DNAI1Q9UI46 699 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 CDY2AQ9Y6F7 541 aa4.68□□□□□ -1.66
TOPBP1-208ENST00000511439 UNC80Q8N2C7 3258 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 SBF1O95248 1867 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 NRP2O60462 931 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 ALDH1L1O75891 902 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 MMP10P09238 476 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 NEK2P51955 445 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 SRSF2Q01130 221 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 PKN2Q16513 984 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 MAN2A1Q16706 1144 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 PTPN21Q16825 1174 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 MUM1Q2TAK8 710 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 GAGE13Q4V321 117 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 SPTY2D1Q68D10 685 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 LDLRAD3Q86YD5 345 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 AMOTL1Q8IY63 956 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 TSPEARQ8WU66 669 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 LARP4BQ92615 738 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 CLIP3Q96DZ5 547 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 ZNF277Q9NRM2 450 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 DPP7Q9UHL4 492 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 SH3BP1Q9Y3L3 701 aa4.67□□□□□ -1.66
TOPBP1-208ENST00000511439 YTHDC2Q9H6S0 1430 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 TMEM191CA6NGB0 347 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 PCDHGA12O60330 932 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 RAMP2O60895 175 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 GCP02774 474 aa4.66□□□□□ -1.66
TOPBP1-208ENST00000511439 HNRNPLP14866 589 aaKnown RBP eCLIP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms