RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 RAB34Q9BZG1 259 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 TRIM6Q9C030 488 aaPredicted RBP9.49□□□□□ -0.89
PDPN-209ENST00000510906 ZBP1Q9H171 429 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 FZD8Q9H461 694 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 ATP13A2Q9NQ11 1180 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 C11orf16Q9NQ32 467 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 PRMT7Q9NVM4 692 aaPredicted RBP9.49□□□□□ -0.89
PDPN-209ENST00000510906 MIOSQ9NXC5 875 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 PRKAG3Q9UGI9 489 aa9.49□□□□□ -0.89
PDPN-209ENST00000510906 USP15Q9Y4E8 981 aaPredicted RBP9.49□□□□□ -0.89
PDPN-209ENST00000510906 A0A1B0GUA9 196 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.48□□□□□ -0.89
PDPN-209ENST00000510906 ARL5CA6NH57 179 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 A6NHS1 94 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 NRP1O14786 923 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 INPPL1O15357 1258 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 CXCL14O95715 111 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 EDN1P05305 212 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 AKAP5P24588 427 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 PRPHP41219 470 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 NAMPTP43490 491 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 SCNN1GP51170 649 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 ATP2C1P98194 919 aaPredicted RBP9.48□□□□□ -0.89
PDPN-209ENST00000510906 LBRQ14739 615 aaKnown RBP9.48□□□□□ -0.89
PDPN-209ENST00000510906 KRT79Q5XKE5 535 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 LARP1BQ659C4 914 aaKnown RBP9.48□□□□□ -0.89
PDPN-209ENST00000510906 SLC27A1Q6PCB7 646 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 TMEM184AQ6ZMB5 413 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 DTHD1Q6ZMT9 781 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 DDX53Q86TM3 631 aaKnown RBP9.48□□□□□ -0.89
PDPN-209ENST00000510906 ZBTB8OSQ8IWT0 167 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 FBF1Q8TES7 1133 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 FAM193BQ96PV7 902 aaPredicted RBP9.48□□□□□ -0.89
PDPN-209ENST00000510906 APOL5Q9BWW9 433 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 CCDC113Q9H0I3 377 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 DNAJC25Q9H1X3 360 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 C2orf40Q9H1Z8 148 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 UBN1Q9NPG3 1134 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 MARCH5Q9NX47 278 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 KANSL3Q9P2N6 904 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 FAN1Q9Y2M0 1017 aa9.48□□□□□ -0.89
PDPN-209ENST00000510906 PRG3Q9Y2Y8 225 aaPredicted RBP9.48□□□□□ -0.89
PDPN-209ENST00000510906 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.48□□□□□ -0.89
PDPN-209ENST00000510906 FSD2A1L4K1 749 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 VWA3AA6NCI4 1184 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 FAM86C2PA6NEL3 165 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 F8W810 466 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 PI4K2BG5E9Z4 385 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 CLASP2O75122 1294 aaKnown RBP9.47□□□□□ -0.89
PDPN-209ENST00000510906 ALDH2P05091 517 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 SSBP05455 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
PDPN-209ENST00000510906 PRKCBP05771 671 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 CTSAP10619 480 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 OR1G1P47890 313 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 DSC1Q08554 894 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 ORC1Q13415 861 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 PRPF4BQ13523 1007 aaKnown RBP9.47□□□□□ -0.89
PDPN-209ENST00000510906 CUL4AQ13619 759 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 LAPTM4AQ15012 233 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 PTPN14Q15678 1187 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 ZRSR1Q15695 479 aaKnown RBP9.47□□□□□ -0.89
PDPN-209ENST00000510906 MAPK6Q16659 721 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 FAM187BQ17R55 369 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 EEF1DP3Q658K8 133 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 ALG1LQ6GMV1 187 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 ANKRD54Q6NXT1 300 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 SYCE2Q6PIF2 218 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 COLGALT2Q8IYK4 626 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 HACE1Q8IYU2 909 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 DAW1Q8N136 415 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 GSTCDQ8NEC7 633 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 DEPTORQ8TB45 409 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 KIFAP3Q92845 792 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 PNMA5Q96PV4 448 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 PLIN2Q99541 437 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 DUSP9Q99956 384 aaKnown RBP9.47□□□□□ -0.89
PDPN-209ENST00000510906 TMEM175Q9BSA9 504 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 RUSC1Q9BVN2 902 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 C1QTNF1Q9BXJ1 281 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 S1PR5Q9H228 398 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 PDZD7Q9H5P4 517 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 RUBCNLQ9H714 662 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 GPAMQ9HCL2 828 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 NEUROD4Q9HD90 331 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 PARP2Q9UGN5 583 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 CDH22Q9UJ99 828 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 DNM3Q9UQ16 869 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 GIT1Q9Y2X7 761 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 HCFC2Q9Y5Z7 792 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 DCHS1Q96JQ0 3298 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 CFAP47Q6ZTR5 3102 aa9.47□□□□□ -0.89
PDPN-209ENST00000510906 ACKR2O00590 384 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 EIF1AYO14602 144 aaKnown RBP9.46□□□□□ -0.9
PDPN-209ENST00000510906 N4BP3O15049 544 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 HIP1RO75146 1068 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 TNFRSF21O75509 655 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 THBS1P07996 1170 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 SRGAP2BP0DMP2 458 aa9.46□□□□□ -0.9
PDPN-209ENST00000510906 TCF3P15923 654 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms