RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 ZBTB41Q5SVQ8 909 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 MPZL3Q6UWV2 235 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 GPIHBP1Q8IV16 184 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 MAP4K3Q8IVH8 894 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 TMEM161BQ8NDZ6 487 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 DDX12PQ92771 950 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 ELSPBP1Q96BH3 223 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 TBC1D32Q96NH3 1257 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 ASB16Q96NS5 453 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 LRRC3BQ96PB8 259 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 PLIN2Q99541 437 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 BCO2Q9BYV7 579 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 PPP4R2Q9NY27 417 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 FBXO4Q9UKT5 387 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 TIMM13Q9Y5L4 95 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-202ENST00000509637 DNAH14Q0VDD8 3507 aa17.42■□□□□ 0.38
RAB40C-202ENST00000509637 PPEF2O14830 753 aa17.41■□□□□ 0.38
RAB40C-202ENST00000509637 SYN3O14994 580 aa17.41■□□□□ 0.38
RAB40C-202ENST00000509637 LAMTOR5O43504 91 aa17.41■□□□□ 0.38
RAB40C-202ENST00000509637 TRAPPC3O43617 180 aa17.41■□□□□ 0.38
RAB40C-202ENST00000509637 TNFSF9P41273 254 aa17.41■□□□□ 0.38
RAB40C-202ENST00000509637 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
RAB40C-202ENST00000509637 CTXN3Q4LDR2 81 aa17.41■□□□□ 0.38
RAB40C-202ENST00000509637 ARSHQ5FYA8 562 aa17.41■□□□□ 0.38
RAB40C-202ENST00000509637 DNAJC25Q9H1X3 360 aa17.41■□□□□ 0.38
RAB40C-202ENST00000509637 PRMT8Q9NR22 394 aaPredicted RBP17.41■□□□□ 0.38
RAB40C-202ENST00000509637 DNM3Q9UQ16 869 aa17.41■□□□□ 0.38
RAB40C-202ENST00000509637 TICRRQ7Z2Z1 1910 aa17.41■□□□□ 0.38
RAB40C-202ENST00000509637 ARNTLO00327 626 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 PRRG1O14668 218 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 LRG1P02750 347 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 MAPTP10636 758 aaKnown RBP17.4■□□□□ 0.38
RAB40C-202ENST00000509637 RPL9P32969 192 aaKnown RBP17.4■□□□□ 0.38
RAB40C-202ENST00000509637 YARSP54577 528 aaKnown RBP17.4■□□□□ 0.38
RAB40C-202ENST00000509637 EPHA5P54756 1037 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 PFKPQ01813 784 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 ADCY1Q08828 1119 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 TWF1Q12792 350 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 HYIQ5T013 277 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 TTC9BQ8N6N2 239 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 BEST2Q8NFU1 509 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 SHKBP1Q8TBC3 707 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 ZNF334Q9HCZ1 680 aaPredicted RBP17.4■□□□□ 0.38
RAB40C-202ENST00000509637 PARD6AQ9NPB6 346 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 NDRG2Q9UN36 371 aaKnown RBP17.4■□□□□ 0.38
RAB40C-202ENST00000509637 NCOR2Q9Y618 2525 aa17.4■□□□□ 0.38
RAB40C-202ENST00000509637 TTC26A0AVF1 554 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 FAM189A1O60320 539 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 KINO60870 393 aaKnown RBP17.39■□□□□ 0.37
RAB40C-202ENST00000509637 CXCL8P10145 99 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 GUCY2CP25092 1073 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 RPS9P46781 194 aaKnown RBP17.39■□□□□ 0.37
RAB40C-202ENST00000509637 CDR1P51861 262 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 SLC12A3P55017 1021 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 DMP1Q13316 513 aaPredicted RBP17.39■□□□□ 0.37
RAB40C-202ENST00000509637 TEAD2Q15562 447 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 RSPO4Q2I0M5 234 aaPredicted RBP17.39■□□□□ 0.37
RAB40C-202ENST00000509637 STXBP5Q5T5C0 1151 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 ZC3H14Q6PJT7 736 aaKnown RBP17.39■□□□□ 0.37
RAB40C-202ENST00000509637 TMC8Q8IU68 726 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 SPIRE2Q8WWL2 714 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 TMEM209Q96SK2 561 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 TCHPQ9BT92 498 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 MKNK1Q9BUB5 465 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 TOPORSQ9NS56 1045 aaPredicted RBP17.39■□□□□ 0.37
RAB40C-202ENST00000509637 SLC38A7Q9NVC3 462 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 C2orf42Q9NWW7 574 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 AFF4Q9UHB7 1163 aaKnown RBP17.39■□□□□ 0.37
RAB40C-202ENST00000509637 MYH11P35749 1972 aa17.39■□□□□ 0.37
RAB40C-202ENST00000509637 ANK1P16157 1881 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 M0QZQ0 153 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 MICAL2O94851 1124 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 MYL4P12829 197 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 ELF1P32519 619 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 AARSP49588 968 aaKnown RBP eCLIP17.38■□□□□ 0.373e-8■■■■■ 29.1
RAB40C-202ENST00000509637 HMGN5P82970 282 aaKnown RBP17.38■□□□□ 0.37
RAB40C-202ENST00000509637 MCL1Q07820 350 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 DMWDQ09019 674 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 TPGS2Q68CL5 300 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 ZNF852Q6ZMS4 543 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 DGLUCYQ7Z3D6 616 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 SYT2Q8N9I0 419 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-202ENST00000509637 HINFPQ9BQA5 517 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 ZFP14Q9HCL3 533 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 ZSCAN32Q9NX65 697 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 ANKFY1Q9P2R3 1169 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 NOL7Q9UMY1 257 aaKnown RBP17.38■□□□□ 0.37
RAB40C-202ENST00000509637 PCDHB8Q9UN66 801 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 RBM19Q9Y4C8 960 aaKnown RBP17.38■□□□□ 0.37
RAB40C-202ENST00000509637 NUB1Q9Y5A7 615 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 SPTBN2O15020 2390 aa17.38■□□□□ 0.37
RAB40C-202ENST00000509637 LACTBL1A8MY62 500 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 H7C4K7 107 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 SPTLC1O15269 473 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 TOM1L1O75674 476 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 SOAT2O75908 522 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 OAZ2O95190 189 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 PLS3P13797 630 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 LRPAP1P30533 357 aa17.37■□□□□ 0.37
RAB40C-202ENST00000509637 GDI1P31150 447 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms