RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 ENOX2Q16206 610 aaKnown RBP13.62□□□□□ -0.23
PDPN-208ENST00000509009 CTXN3Q4LDR2 81 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 ZBTB41Q5SVQ8 909 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 TPGS2Q68CL5 300 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 PHLDB3Q6NSJ2 640 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 POTEHQ6S545 545 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 CCDC105Q8IYK2 499 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 APPL2Q8NEU8 664 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 EPSTI1Q96J88 318 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 TBC1D17Q9HA65 648 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 PCDHB8Q9UN66 801 aa13.62□□□□□ -0.23
PDPN-208ENST00000509009 MRPS23Q9Y3D9 190 aaKnown RBP13.62□□□□□ -0.23
PDPN-208ENST00000509009 NOTCH4Q99466 2003 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 VPS37CA5D8V6 355 aaPredicted RBP13.61□□□□□ -0.23
PDPN-208ENST00000509009 M0QZQ0 153 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 PRRG1O14668 218 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 OAZ2O95190 189 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
PDPN-208ENST00000509009 PDCP20941 246 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 NMT1P30419 496 aaKnown RBP13.61□□□□□ -0.23
PDPN-208ENST00000509009 NBL1P41271 181 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 KYAT1Q16773 422 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 SPECC1Q5M775 1068 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 SLC39A4Q6P5W5 647 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 MTSS1LQ765P7 747 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 NPAS3Q8IXF0 933 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 RASSF8Q8NHQ8 419 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 LARP4BQ92615 738 aaKnown RBP13.61□□□□□ -0.23
PDPN-208ENST00000509009 MCRS1Q96EZ8 462 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 TSPAN18Q96SJ8 248 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 ZHX3Q9H4I2 956 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 RPF1Q9H9Y2 349 aaKnown RBP13.61□□□□□ -0.23
PDPN-208ENST00000509009 CYP4F11Q9HBI6 524 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 MAFFQ9ULX9 164 aa13.61□□□□□ -0.23
PDPN-208ENST00000509009 UBQLN1Q9UMX0 589 aaKnown RBP13.61□□□□□ -0.23
PDPN-208ENST00000509009 ANKRD63C9JTQ0 380 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 K7ENM7 598 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 CITO14578 2027 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 HNRNPDLO14979 420 aaKnown RBP13.6□□□□□ -0.23
PDPN-208ENST00000509009 GFRA3O60609 400 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 LRG1P02750 347 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 SYT1P21579 422 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 AARSP49588 968 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDPN-208ENST00000509009 GUCY2FP51841 1108 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 STARD6P59095 220 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 PPP2R3AQ06190 1150 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 SLC5A9Q2M3M2 681 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 ZC2HC1CQ53FD0 456 aaPredicted RBP13.6□□□□□ -0.23
PDPN-208ENST00000509009 FAM173BQ6P4H8 233 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 ING5Q8WYH8 240 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 ARHGEF3Q9NR81 526 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 GDE1Q9NZC3 331 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 AFF4Q9UHB7 1163 aaKnown RBP13.6□□□□□ -0.23
PDPN-208ENST00000509009 FBXO2Q9UK22 296 aaPredicted RBP13.6□□□□□ -0.23
PDPN-208ENST00000509009 CPSF3Q9UKF6 684 aaKnown RBP13.6□□□□□ -0.23
PDPN-208ENST00000509009 SIT1Q9Y3P8 196 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 TIMM13Q9Y5L4 95 aaPredicted RBP13.6□□□□□ -0.23
PDPN-208ENST00000509009 SRPRBQ9Y5M8 271 aaKnown RBP13.6□□□□□ -0.23
PDPN-208ENST00000509009 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.6□□□□□ -0.23
PDPN-208ENST00000509009 VPS13AQ96RL7 3174 aa13.6□□□□□ -0.23
PDPN-208ENST00000509009 FAM186AA6NE01 2351 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 TBCAO75347 108 aaKnown RBP13.59□□□□□ -0.23
PDPN-208ENST00000509009 RFX1P22670 979 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 ADCY1Q08828 1119 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 RESTQ13127 1097 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 ANGPT1Q15389 498 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 SLC44A4Q53GD3 710 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 PRSS36Q5K4E3 855 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 SPATA1Q5VX52 437 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 ZNF280DQ6N043 979 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 RNF19BQ6ZMZ0 732 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 ZNF720Q7Z2F6 126 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 MAP4K3Q8IVH8 894 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 CD302Q8IX05 232 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 KRI1Q8N9T8 703 aaKnown RBP13.59□□□□□ -0.23
PDPN-208ENST00000509009 BEST2Q8NFU1 509 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 TCEAL4Q96EI5 215 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 FAM212AQ96EL1 285 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 SHDQ96IW2 340 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 CLIC6Q96NY7 704 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 KXD1Q9BQD3 176 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 CORO1BQ9BR76 489 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 MSTO1Q9BUK6 570 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 PLA2G2FQ9BZM2 168 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 ST6GALNAC4Q9H4F1 302 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 DLGAP2Q9P1A6 1054 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 CEP72Q9P209 647 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 INSL5Q9Y5Q6 135 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 STYXL1Q9Y6J8 313 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 MYH11P35749 1972 aa13.59□□□□□ -0.23
PDPN-208ENST00000509009 CFAP54Q96N23 3096 aa13.58□□□□□ -0.23
PDPN-208ENST00000509009 TISP43B9A030 160 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 ZNF197O14709 1029 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 PPEF2O14830 753 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 XPOTO43592 962 aaKnown RBP13.58□□□□□ -0.24
PDPN-208ENST00000509009 ECI2O75521 394 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 MICAL2O94851 1124 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 VNN2O95498 520 aa13.58□□□□□ -0.24
PDPN-208ENST00000509009 DCNP07585 359 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms