RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 POTEMA6NI47 508 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 PPP1R3GB7ZBB8 358 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 TK2O00142 265 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 DKC1O60832 514 aaKnown RBP eCLIP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 SRGAP2O75044 1071 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 CSPG5O95196 566 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 ECDO95905 644 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 SHBGP04278 402 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 GYPCP04921 128 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 TFAP2AP05549 437 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 ALOX5P09917 674 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 PCNAP12004 261 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 MARCKSP29966 332 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 CTNNA1P35221 906 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 TMPOP42166 694 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 PLTPP55058 493 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 SF3B4Q15427 424 aaKnown RBP eCLIP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 GRIK5Q16478 980 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 NT5DC1Q5TFE4 455 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 ANO1Q5XXA6 986 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 TTBK2Q6IQ55 1244 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 ALKBH2Q6NS38 261 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 ELMSAN1Q6PJG2 1045 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 KBTBD2Q8IY47 623 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 CENPSQ8N2Z9 138 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 SLC17A8Q8NDX2 589 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 TTLQ8NG68 377 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 NLRP7Q8WX94 980 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 SLC7A6OSQ96CW6 309 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 DYDC2Q96IM9 177 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 CEP170P1Q96L14 293 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 UBAC1Q9BSL1 405 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 TSEN34Q9BSV6 310 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 TMEM109Q9BVC6 243 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 STMN4Q9H169 189 aaPredicted RBP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 ZHX3Q9H4I2 956 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 ZNF287Q9HBT7 754 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 SYTL2Q9HCH5 934 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 SAR1AQ9NR31 198 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 MAN1C1Q9NR34 630 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 EMC3Q9P0I2 261 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 KIF17Q9P2E2 1029 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 MBD2Q9UBB5 411 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 ADD3Q9UEY8 706 aaKnown RBP11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 IVNS1ABPQ9Y6Y0 642 aa11.4□□□□□ -0.58
PDLIM5-210ENST00000508216 CARMIL3Q8ND23 1372 aa11.4□□□□□ -0.59
PDLIM5-210ENST00000508216 ENC1O14682 589 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 SLC9A3R1O14745 358 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 CAPN9O14815 690 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 SHOXO15266 292 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 NCAM2O15394 837 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 TLR3O15455 904 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 SIN3BO75182 1162 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 TBX10O75333 385 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 DDHD2O94830 711 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 NUDT17P0C025 328 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 PRKCAP17252 672 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 ATF6P18850 670 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 PTPN4P29074 926 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 ZNF135P52742 658 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 MAP3K7CLP57077 242 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 MRPS15P82914 257 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 EDRF1Q3B7T1 1238 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 IGSF11Q5DX21 431 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 TNFAIP8L3Q5GJ75 292 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 C6orf10Q5SRN2 563 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 ZBTB41Q5SVQ8 909 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 PRR23CQ6ZRP0 262 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 CCDC28AQ8IWP9 274 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 PRPF31Q8WWY3 499 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 C7orf26Q96N11 449 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 NOX5Q96PH1 765 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 BTBD9Q96Q07 612 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 DDX50Q9BQ39 737 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 SENP6Q9GZR1 1112 aaPredicted RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 KCNN2Q9H2S1 579 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 INTS9Q9NV88 658 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 DDX18Q9NVP1 670 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 EHD2Q9NZN4 543 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 KLHL14Q9P2G3 628 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 CDH7Q9ULB5 785 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 GUCA1BQ9UMX6 200 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 HPSEQ9Y251 543 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 RWDD3Q9Y3V2 267 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 PSME4Q14997 1843 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 GOLGA8JA6NMD2 632 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 H3BQV1 296 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 ACOX3O15254 700 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 ADCY6O43306 1168 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 PDE8AO60658 829 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 HEXIM1O94992 359 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 PLEKHA8P1O95397 391 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 AGTP01019 485 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 HMGN1P05114 100 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 RARBP10826 455 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 MTHFD1P11586 935 aaKnown RBP11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 COL9A1P20849 921 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 CXCR2P25025 360 aa11.39□□□□□ -0.59
PDLIM5-210ENST00000508216 CDK9P50750 372 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms